RNA–Protein interactions for RNA: ENST00000435328.1

RAPGEF4-AS1-202, RAPGEF4 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4-AS1, Length 4,625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-AS1-202ENST00000435328 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
RAPGEF4-AS1-202ENST00000435328 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
RAPGEF4-AS1-202ENST00000435328 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
RAPGEF4-AS1-202ENST00000435328 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
RAPGEF4-AS1-202ENST00000435328 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
RAPGEF4-AS1-202ENST00000435328 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
RAPGEF4-AS1-202ENST00000435328 MYT1Q01538 1121 aa20.84■□□□□ 0.93
RAPGEF4-AS1-202ENST00000435328 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
RAPGEF4-AS1-202ENST00000435328 HRCP23327 699 aa20.7■□□□□ 0.9
RAPGEF4-AS1-202ENST00000435328 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF4-AS1-202ENST00000435328 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
RAPGEF4-AS1-202ENST00000435328 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
RAPGEF4-AS1-202ENST00000435328 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.81
RAPGEF4-AS1-202ENST00000435328 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF4-AS1-202ENST00000435328 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
RAPGEF4-AS1-202ENST00000435328 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
RAPGEF4-AS1-202ENST00000435328 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
RAPGEF4-AS1-202ENST00000435328 APLP2Q06481 763 aa19.92■□□□□ 0.78
RAPGEF4-AS1-202ENST00000435328 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
RAPGEF4-AS1-202ENST00000435328 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
RAPGEF4-AS1-202ENST00000435328 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
RAPGEF4-AS1-202ENST00000435328 TTBK1Q5TCY1 1321 aaPredicted RBP19.67■□□□□ 0.74
RAPGEF4-AS1-202ENST00000435328 NEFLP07196 543 aa19.53■□□□□ 0.72
RAPGEF4-AS1-202ENST00000435328 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
RAPGEF4-AS1-202ENST00000435328 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
RAPGEF4-AS1-202ENST00000435328 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
RAPGEF4-AS1-202ENST00000435328 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
RAPGEF4-AS1-202ENST00000435328 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
RAPGEF4-AS1-202ENST00000435328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
RAPGEF4-AS1-202ENST00000435328 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
RAPGEF4-AS1-202ENST00000435328 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
RAPGEF4-AS1-202ENST00000435328 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
RAPGEF4-AS1-202ENST00000435328 CLSPNQ9HAW4 1339 aa19.01■□□□□ 0.63
RAPGEF4-AS1-202ENST00000435328 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
RAPGEF4-AS1-202ENST00000435328 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
RAPGEF4-AS1-202ENST00000435328 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
RAPGEF4-AS1-202ENST00000435328 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
RAPGEF4-AS1-202ENST00000435328 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF4-AS1-202ENST00000435328 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
RAPGEF4-AS1-202ENST00000435328 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
RAPGEF4-AS1-202ENST00000435328 BCANQ96GW7 911 aa18.67■□□□□ 0.58
RAPGEF4-AS1-202ENST00000435328 ITGAEP38570 1179 aa18.66■□□□□ 0.58
RAPGEF4-AS1-202ENST00000435328 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
RAPGEF4-AS1-202ENST00000435328 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF4-AS1-202ENST00000435328 MYT1LQ9UL68 1186 aa18.56■□□□□ 0.56
RAPGEF4-AS1-202ENST00000435328 ANP32CO43423 234 aa18.54■□□□□ 0.56
RAPGEF4-AS1-202ENST00000435328 MIER1Q8N108 512 aa18.45■□□□□ 0.54
RAPGEF4-AS1-202ENST00000435328 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
RAPGEF4-AS1-202ENST00000435328 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
RAPGEF4-AS1-202ENST00000435328 FKBP8Q14318 412 aa18.42■□□□□ 0.54
RAPGEF4-AS1-202ENST00000435328 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
RAPGEF4-AS1-202ENST00000435328 FAM50AQ14320 339 aaKnown RBP18.27■□□□□ 0.52
RAPGEF4-AS1-202ENST00000435328 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
RAPGEF4-AS1-202ENST00000435328 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
RAPGEF4-AS1-202ENST00000435328 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
RAPGEF4-AS1-202ENST00000435328 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
RAPGEF4-AS1-202ENST00000435328 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
RAPGEF4-AS1-202ENST00000435328 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
RAPGEF4-AS1-202ENST00000435328 EEA1Q15075 1411 aa18.07■□□□□ 0.48
RAPGEF4-AS1-202ENST00000435328 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
RAPGEF4-AS1-202ENST00000435328 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
RAPGEF4-AS1-202ENST00000435328 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
RAPGEF4-AS1-202ENST00000435328 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
RAPGEF4-AS1-202ENST00000435328 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
RAPGEF4-AS1-202ENST00000435328 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
RAPGEF4-AS1-202ENST00000435328 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
RAPGEF4-AS1-202ENST00000435328 CLIP1P30622 1438 aa17.96■□□□□ 0.47
RAPGEF4-AS1-202ENST00000435328 NBR1Q14596 966 aa17.95■□□□□ 0.46
RAPGEF4-AS1-202ENST00000435328 EIF5BO60841 1220 aaKnown RBP17.94■□□□□ 0.46
RAPGEF4-AS1-202ENST00000435328 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
RAPGEF4-AS1-202ENST00000435328 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
RAPGEF4-AS1-202ENST00000435328 GLIPR1L2Q4G1C9 344 aa17.9■□□□□ 0.46
RAPGEF4-AS1-202ENST00000435328 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.45
RAPGEF4-AS1-202ENST00000435328 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
RAPGEF4-AS1-202ENST00000435328 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
RAPGEF4-AS1-202ENST00000435328 RBM19Q9Y4C8 960 aaKnown RBP17.83■□□□□ 0.44
RAPGEF4-AS1-202ENST00000435328 ABCC9O60706 1549 aa17.82■□□□□ 0.44
RAPGEF4-AS1-202ENST00000435328 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
RAPGEF4-AS1-202ENST00000435328 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
RAPGEF4-AS1-202ENST00000435328 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
RAPGEF4-AS1-202ENST00000435328 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 DDRGK1Q96HY6 314 aa17.68■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 PPM1GO15355 546 aaPredicted RBP17.67■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAPGEF4-AS1-202ENST00000435328 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
RAPGEF4-AS1-202ENST00000435328 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
RAPGEF4-AS1-202ENST00000435328 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms