Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AL033527.5-201ENST00000641382 801 ntBASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 CICP11-201ENST00000434745 2827 ntBASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AC005562.1-201ENST00000583030 3219 ntBASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 KRT8P22-201ENST00000562317 1415 ntBASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.06□□□□□ -0.16
TUBA1CQ9BQE3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 AC016397.2-201ENST00000624848 1985 ntBASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TUBA1CQ9BQE3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms