RNA–Protein interactions for RNA: ENST00000360121.4

SPN-201, Transcript of sialophorin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPN, Length 6,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-201ENST00000360121 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
SPN-201ENST00000360121 EHMT2Q96KQ7 1210 aa24.41■■□□□ 1.5
SPN-201ENST00000360121 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
SPN-201ENST00000360121 ERICH6Q7L0X2 663 aa23.98■■□□□ 1.43
SPN-201ENST00000360121 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SPN-201ENST00000360121 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SPN-201ENST00000360121 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
SPN-201ENST00000360121 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
SPN-201ENST00000360121 APLP2Q06481 763 aa23.21■■□□□ 1.31
SPN-201ENST00000360121 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
SPN-201ENST00000360121 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
SPN-201ENST00000360121 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
SPN-201ENST00000360121 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
SPN-201ENST00000360121 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
SPN-201ENST00000360121 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
SPN-201ENST00000360121 CENPBP07199 599 aaPredicted RBP22.68■■□□□ 1.22
SPN-201ENST00000360121 NEFLP07196 543 aa22.67■■□□□ 1.22
SPN-201ENST00000360121 DAXXQ9UER7 740 aaPredicted RBP22.64■■□□□ 1.22
SPN-201ENST00000360121 CNGB1Q14028 1251 aaPredicted RBP22.49■■□□□ 1.19
SPN-201ENST00000360121 POLR3GLQ9BT43 218 aa22.43■■□□□ 1.18
SPN-201ENST00000360121 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
SPN-201ENST00000360121 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
SPN-201ENST00000360121 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
SPN-201ENST00000360121 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
SPN-201ENST00000360121 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
SPN-201ENST00000360121 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
SPN-201ENST00000360121 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
SPN-201ENST00000360121 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
SPN-201ENST00000360121 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
SPN-201ENST00000360121 ITGAEP38570 1179 aa21.79■■□□□ 1.08
SPN-201ENST00000360121 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
SPN-201ENST00000360121 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
SPN-201ENST00000360121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
SPN-201ENST00000360121 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
SPN-201ENST00000360121 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
SPN-201ENST00000360121 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
SPN-201ENST00000360121 BCANQ96GW7 911 aa21.39■■□□□ 1.02
SPN-201ENST00000360121 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
SPN-201ENST00000360121 EIF5BO60841 1220 aaKnown RBP21.31■■□□□ 1
SPN-201ENST00000360121 CANXP27824 592 aaKnown RBP21.1■□□□□ 0.97
SPN-201ENST00000360121 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
SPN-201ENST00000360121 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
SPN-201ENST00000360121 ARXQ96QS3 562 aa20.98■□□□□ 0.95
SPN-201ENST00000360121 HRCP23327 699 aa20.93■□□□□ 0.94
SPN-201ENST00000360121 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
SPN-201ENST00000360121 CDK11AQ9UQ88 783 aaPredicted RBP20.88■□□□□ 0.93
SPN-201ENST00000360121 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
SPN-201ENST00000360121 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
SPN-201ENST00000360121 TULP1O00294 542 aaPredicted RBP20.86■□□□□ 0.93
SPN-201ENST00000360121 ANP32BQ92688 251 aaKnown RBP20.82■□□□□ 0.92
SPN-201ENST00000360121 HSP90AA1P07900 732 aaKnown RBP20.8■□□□□ 0.92
SPN-201ENST00000360121 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
SPN-201ENST00000360121 CDK11BP21127 795 aaKnown RBP20.76■□□□□ 0.91
SPN-201ENST00000360121 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
SPN-201ENST00000360121 NCBP3Q53F19 620 aaKnown RBP20.74■□□□□ 0.91
SPN-201ENST00000360121 A0A0G2JS52 829 aa20.72■□□□□ 0.91
SPN-201ENST00000360121 NEFMP07197 916 aa20.71■□□□□ 0.91
SPN-201ENST00000360121 TRIM26Q12899 539 aaPredicted RBP20.67■□□□□ 0.9
SPN-201ENST00000360121 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
SPN-201ENST00000360121 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
SPN-201ENST00000360121 GLIPR1L2Q4G1C9 344 aa20.6■□□□□ 0.89
SPN-201ENST00000360121 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.89
SPN-201ENST00000360121 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
SPN-201ENST00000360121 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
SPN-201ENST00000360121 NBR1Q14596 966 aa20.53■□□□□ 0.88
SPN-201ENST00000360121 ANP32CO43423 234 aa20.51■□□□□ 0.87
SPN-201ENST00000360121 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
SPN-201ENST00000360121 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
SPN-201ENST00000360121 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
SPN-201ENST00000360121 TAOK2Q9UL54 1235 aa20.39■□□□□ 0.85
SPN-201ENST00000360121 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
SPN-201ENST00000360121 ZBTB7CA1YPR0 619 aa20.33■□□□□ 0.85
SPN-201ENST00000360121 FBLN2P98095 1184 aa20.3■□□□□ 0.84
SPN-201ENST00000360121 UPF2Q9HAU5 1272 aaKnown RBP20.29■□□□□ 0.84
SPN-201ENST00000360121 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
SPN-201ENST00000360121 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
SPN-201ENST00000360121 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
SPN-201ENST00000360121 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
SPN-201ENST00000360121 FKBP8Q14318 412 aa20.12■□□□□ 0.81
SPN-201ENST00000360121 NCLP19338 710 aaKnown RBP20.12■□□□□ 0.81
SPN-201ENST00000360121 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPN-201ENST00000360121 CLSTN1O94985 981 aa20.1■□□□□ 0.81
SPN-201ENST00000360121 DNTTIP2Q5QJE6 756 aaKnown RBP20.08■□□□□ 0.8
SPN-201ENST00000360121 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
SPN-201ENST00000360121 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
SPN-201ENST00000360121 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
SPN-201ENST00000360121 PRM3Q9NNZ6 103 aa20.03■□□□□ 0.8
SPN-201ENST00000360121 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
SPN-201ENST00000360121 TRIM44Q96DX7 344 aaPredicted RBP20.02■□□□□ 0.8
SPN-201ENST00000360121 PTMAP06454 111 aaKnown RBP20.02■□□□□ 0.79
SPN-201ENST00000360121 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
SPN-201ENST00000360121 ZRSR1Q15695 479 aaKnown RBP19.97■□□□□ 0.79
SPN-201ENST00000360121 RTN4Q9NQC3 1192 aaKnown RBP19.95■□□□□ 0.78
SPN-201ENST00000360121 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
SPN-201ENST00000360121 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
SPN-201ENST00000360121 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
SPN-201ENST00000360121 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
SPN-201ENST00000360121 CCDC136Q96JN2 1154 aa19.87■□□□□ 0.77
SPN-201ENST00000360121 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
SPN-201ENST00000360121 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms