RNA–Protein interactions for RNA: ENST00000500823.2

GS1-24F4.2-201, humanhuman

TSL 1 (best) BASIC

Gene GS1-24F4.2, Length 1,110 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GS1-24F4.2-201ENST00000500823 NISCHQ9Y2I1 1504 aa38.51■■■■□ 3.76
GS1-24F4.2-201ENST00000500823 ABCC9O60706 1549 aa34.73■■■■□ 3.15
GS1-24F4.2-201ENST00000500823 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
GS1-24F4.2-201ENST00000500823 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
GS1-24F4.2-201ENST00000500823 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
GS1-24F4.2-201ENST00000500823 DNAJC5BQ9UF47 199 aa32.75■■■□□ 2.83
GS1-24F4.2-201ENST00000500823 NACADO15069 1562 aa32.71■■■□□ 2.83
GS1-24F4.2-201ENST00000500823 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
GS1-24F4.2-201ENST00000500823 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
GS1-24F4.2-201ENST00000500823 UNC13AQ9UPW8 1703 aa32.16■■■□□ 2.74
GS1-24F4.2-201ENST00000500823 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
GS1-24F4.2-201ENST00000500823 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
GS1-24F4.2-201ENST00000500823 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
GS1-24F4.2-201ENST00000500823 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
GS1-24F4.2-201ENST00000500823 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
GS1-24F4.2-201ENST00000500823 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
GS1-24F4.2-201ENST00000500823 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
GS1-24F4.2-201ENST00000500823 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
GS1-24F4.2-201ENST00000500823 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
GS1-24F4.2-201ENST00000500823 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
GS1-24F4.2-201ENST00000500823 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
GS1-24F4.2-201ENST00000500823 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
GS1-24F4.2-201ENST00000500823 SMARCA4P51532 1647 aa30.01■■■□□ 2.39
GS1-24F4.2-201ENST00000500823 ERCC6Q03468 1493 aa30■■■□□ 2.39
GS1-24F4.2-201ENST00000500823 CUX2O14529 1486 aa29.91■■■□□ 2.38
GS1-24F4.2-201ENST00000500823 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
GS1-24F4.2-201ENST00000500823 BAZ1AQ9NRL2 1556 aaPredicted RBP29.88■■■□□ 2.37
GS1-24F4.2-201ENST00000500823 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
GS1-24F4.2-201ENST00000500823 NESP48681 1621 aa29.79■■■□□ 2.36
GS1-24F4.2-201ENST00000500823 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
GS1-24F4.2-201ENST00000500823 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
GS1-24F4.2-201ENST00000500823 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
GS1-24F4.2-201ENST00000500823 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.3
GS1-24F4.2-201ENST00000500823 THOC2Q8NI27 1593 aaKnown RBP29.38■■■□□ 2.29
GS1-24F4.2-201ENST00000500823 CADPSQ9ULU8 1353 aa29.37■■■□□ 2.29
GS1-24F4.2-201ENST00000500823 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
GS1-24F4.2-201ENST00000500823 WIZO95785 1651 aa29.32■■■□□ 2.28
GS1-24F4.2-201ENST00000500823 MRC2Q9UBG0 1479 aa29.12■■■□□ 2.25
GS1-24F4.2-201ENST00000500823 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
GS1-24F4.2-201ENST00000500823 WDR62O43379 1518 aa29■■■□□ 2.23
GS1-24F4.2-201ENST00000500823 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
GS1-24F4.2-201ENST00000500823 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
GS1-24F4.2-201ENST00000500823 CFTRP13569 1480 aa28.95■■■□□ 2.22
GS1-24F4.2-201ENST00000500823 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.22
GS1-24F4.2-201ENST00000500823 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
GS1-24F4.2-201ENST00000500823 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
GS1-24F4.2-201ENST00000500823 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
GS1-24F4.2-201ENST00000500823 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
GS1-24F4.2-201ENST00000500823 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
GS1-24F4.2-201ENST00000500823 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
GS1-24F4.2-201ENST00000500823 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
GS1-24F4.2-201ENST00000500823 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
GS1-24F4.2-201ENST00000500823 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
GS1-24F4.2-201ENST00000500823 DNMBPQ6XZF7 1577 aa28.25■■■□□ 2.11
GS1-24F4.2-201ENST00000500823 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 FBLN2P98095 1184 aa28.17■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
GS1-24F4.2-201ENST00000500823 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
GS1-24F4.2-201ENST00000500823 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
GS1-24F4.2-201ENST00000500823 CYB5RLQ6IPT4 315 aa28.09■■■□□ 2.09
GS1-24F4.2-201ENST00000500823 SOGA1O94964 1423 aa28.09■■■□□ 2.09
GS1-24F4.2-201ENST00000500823 ARHGEF11O15085 1522 aa28.08■■■□□ 2.08
GS1-24F4.2-201ENST00000500823 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
GS1-24F4.2-201ENST00000500823 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
GS1-24F4.2-201ENST00000500823 CHD1O14646 1710 aa28■■■□□ 2.07
GS1-24F4.2-201ENST00000500823 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
GS1-24F4.2-201ENST00000500823 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
GS1-24F4.2-201ENST00000500823 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
GS1-24F4.2-201ENST00000500823 CUX1P39880 1505 aa27.87■■■□□ 2.05
GS1-24F4.2-201ENST00000500823 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
GS1-24F4.2-201ENST00000500823 TRHP20396 242 aaPredicted RBP27.83■■■□□ 2.05
GS1-24F4.2-201ENST00000500823 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
GS1-24F4.2-201ENST00000500823 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
GS1-24F4.2-201ENST00000500823 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
GS1-24F4.2-201ENST00000500823 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
GS1-24F4.2-201ENST00000500823 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
GS1-24F4.2-201ENST00000500823 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
GS1-24F4.2-201ENST00000500823 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
GS1-24F4.2-201ENST00000500823 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
GS1-24F4.2-201ENST00000500823 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
GS1-24F4.2-201ENST00000500823 PBRM1Q86U86 1689 aa27.57■■■□□ 2
GS1-24F4.2-201ENST00000500823 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
GS1-24F4.2-201ENST00000500823 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
GS1-24F4.2-201ENST00000500823 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
GS1-24F4.2-201ENST00000500823 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
GS1-24F4.2-201ENST00000500823 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
GS1-24F4.2-201ENST00000500823 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.96
GS1-24F4.2-201ENST00000500823 NUP160Q12769 1436 aa27.29■■□□□ 1.96
GS1-24F4.2-201ENST00000500823 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
GS1-24F4.2-201ENST00000500823 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
GS1-24F4.2-201ENST00000500823 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
GS1-24F4.2-201ENST00000500823 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
GS1-24F4.2-201ENST00000500823 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
GS1-24F4.2-201ENST00000500823 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
GS1-24F4.2-201ENST00000500823 PRG4Q92954 1404 aaPredicted RBP27.12■■□□□ 1.93
GS1-24F4.2-201ENST00000500823 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
GS1-24F4.2-201ENST00000500823 NPM1P06748 294 aaKnown RBP eCLIP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms