RNA–Protein interactions for RNA: ENST00000521118.5

CDKL3-206, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKL3, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-206ENST00000521118 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
CDKL3-206ENST00000521118 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
CDKL3-206ENST00000521118 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
CDKL3-206ENST00000521118 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
CDKL3-206ENST00000521118 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
CDKL3-206ENST00000521118 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
CDKL3-206ENST00000521118 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
CDKL3-206ENST00000521118 ABCC9O60706 1549 aa25.63■■□□□ 1.69
CDKL3-206ENST00000521118 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
CDKL3-206ENST00000521118 SCRIBQ14160 1630 aa25.57■■□□□ 1.68
CDKL3-206ENST00000521118 NACADO15069 1562 aa25.36■■□□□ 1.65
CDKL3-206ENST00000521118 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
CDKL3-206ENST00000521118 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
CDKL3-206ENST00000521118 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
CDKL3-206ENST00000521118 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
CDKL3-206ENST00000521118 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
CDKL3-206ENST00000521118 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
CDKL3-206ENST00000521118 WIZO95785 1651 aa24.69■■□□□ 1.54
CDKL3-206ENST00000521118 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
CDKL3-206ENST00000521118 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
CDKL3-206ENST00000521118 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
CDKL3-206ENST00000521118 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
CDKL3-206ENST00000521118 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.5
CDKL3-206ENST00000521118 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
CDKL3-206ENST00000521118 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
CDKL3-206ENST00000521118 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
CDKL3-206ENST00000521118 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
CDKL3-206ENST00000521118 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
CDKL3-206ENST00000521118 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
CDKL3-206ENST00000521118 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
CDKL3-206ENST00000521118 ABCC8Q09428 1581 aa23.96■■□□□ 1.43
CDKL3-206ENST00000521118 PCGF6Q9BYE7 350 aa23.95■■□□□ 1.42
CDKL3-206ENST00000521118 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
CDKL3-206ENST00000521118 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
CDKL3-206ENST00000521118 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
CDKL3-206ENST00000521118 HRCP23327 699 aa23.7■■□□□ 1.38
CDKL3-206ENST00000521118 SOGA1O94964 1423 aa23.63■■□□□ 1.37
CDKL3-206ENST00000521118 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
CDKL3-206ENST00000521118 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
CDKL3-206ENST00000521118 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
CDKL3-206ENST00000521118 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
CDKL3-206ENST00000521118 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
CDKL3-206ENST00000521118 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
CDKL3-206ENST00000521118 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
CDKL3-206ENST00000521118 EEA1Q15075 1411 aa23.37■■□□□ 1.33
CDKL3-206ENST00000521118 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
CDKL3-206ENST00000521118 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
CDKL3-206ENST00000521118 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
CDKL3-206ENST00000521118 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
CDKL3-206ENST00000521118 GOLGA3Q08378 1498 aa23.22■■□□□ 1.31
CDKL3-206ENST00000521118 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
CDKL3-206ENST00000521118 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
CDKL3-206ENST00000521118 KIF21BO75037 1637 aa23.17■■□□□ 1.3
CDKL3-206ENST00000521118 CFTRP13569 1480 aa23.16■■□□□ 1.3
CDKL3-206ENST00000521118 CUX1P39880 1505 aa23.15■■□□□ 1.3
CDKL3-206ENST00000521118 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
CDKL3-206ENST00000521118 CC2D2AQ9P2K1 1620 aa23.13■■□□□ 1.29
CDKL3-206ENST00000521118 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.28
CDKL3-206ENST00000521118 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
CDKL3-206ENST00000521118 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
CDKL3-206ENST00000521118 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
CDKL3-206ENST00000521118 CLIP1P30622 1438 aa22.93■■□□□ 1.26
CDKL3-206ENST00000521118 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
CDKL3-206ENST00000521118 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
CDKL3-206ENST00000521118 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
CDKL3-206ENST00000521118 KIF27Q86VH2 1401 aa22.83■■□□□ 1.24
CDKL3-206ENST00000521118 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
CDKL3-206ENST00000521118 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
CDKL3-206ENST00000521118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
CDKL3-206ENST00000521118 NESP48681 1621 aa22.77■■□□□ 1.24
CDKL3-206ENST00000521118 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
CDKL3-206ENST00000521118 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
CDKL3-206ENST00000521118 CUX2O14529 1486 aa22.73■■□□□ 1.23
CDKL3-206ENST00000521118 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
CDKL3-206ENST00000521118 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
CDKL3-206ENST00000521118 IGF1RP08069 1367 aa22.66■■□□□ 1.22
CDKL3-206ENST00000521118 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
CDKL3-206ENST00000521118 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
CDKL3-206ENST00000521118 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.21
CDKL3-206ENST00000521118 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
CDKL3-206ENST00000521118 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
CDKL3-206ENST00000521118 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
CDKL3-206ENST00000521118 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
CDKL3-206ENST00000521118 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
CDKL3-206ENST00000521118 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
CDKL3-206ENST00000521118 APLP2Q06481 763 aa22.49■■□□□ 1.19
CDKL3-206ENST00000521118 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
CDKL3-206ENST00000521118 HNRNPUL2Q1KMD3 747 aaKnown RBP22.46■■□□□ 1.19
CDKL3-206ENST00000521118 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
CDKL3-206ENST00000521118 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
CDKL3-206ENST00000521118 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
CDKL3-206ENST00000521118 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
CDKL3-206ENST00000521118 CUL7Q14999 1698 aa22.29■■□□□ 1.16
CDKL3-206ENST00000521118 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
CDKL3-206ENST00000521118 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
CDKL3-206ENST00000521118 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
CDKL3-206ENST00000521118 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
CDKL3-206ENST00000521118 CTTNBP2Q8WZ74 1663 aa22.22■■□□□ 1.15
CDKL3-206ENST00000521118 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
CDKL3-206ENST00000521118 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms