RNA–Protein interactions for RNA: ENST00000540167.5

KLHL13-207, Transcript of kelch like family member 13, humanhuman

TSL 2 BASIC

Gene KLHL13, Length 3,396 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13-207ENST00000540167 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
KLHL13-207ENST00000540167 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
KLHL13-207ENST00000540167 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
KLHL13-207ENST00000540167 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
KLHL13-207ENST00000540167 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
KLHL13-207ENST00000540167 HRCP23327 699 aa23.74■■□□□ 1.39
KLHL13-207ENST00000540167 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
KLHL13-207ENST00000540167 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
KLHL13-207ENST00000540167 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
KLHL13-207ENST00000540167 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
KLHL13-207ENST00000540167 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
KLHL13-207ENST00000540167 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
KLHL13-207ENST00000540167 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
KLHL13-207ENST00000540167 ABCC9O60706 1549 aa23.27■■□□□ 1.32
KLHL13-207ENST00000540167 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
KLHL13-207ENST00000540167 TRIM41Q8WV44 630 aa22.89■■□□□ 1.26
KLHL13-207ENST00000540167 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
KLHL13-207ENST00000540167 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
KLHL13-207ENST00000540167 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
KLHL13-207ENST00000540167 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
KLHL13-207ENST00000540167 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
KLHL13-207ENST00000540167 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
KLHL13-207ENST00000540167 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
KLHL13-207ENST00000540167 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
KLHL13-207ENST00000540167 ZEB1P37275 1124 aaPredicted RBP22.38■■□□□ 1.17
KLHL13-207ENST00000540167 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
KLHL13-207ENST00000540167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
KLHL13-207ENST00000540167 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
KLHL13-207ENST00000540167 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
KLHL13-207ENST00000540167 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
KLHL13-207ENST00000540167 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
KLHL13-207ENST00000540167 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
KLHL13-207ENST00000540167 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
KLHL13-207ENST00000540167 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
KLHL13-207ENST00000540167 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
KLHL13-207ENST00000540167 NACADO15069 1562 aa21.93■■□□□ 1.1
KLHL13-207ENST00000540167 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
KLHL13-207ENST00000540167 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
KLHL13-207ENST00000540167 WIZO95785 1651 aa21.88■■□□□ 1.09
KLHL13-207ENST00000540167 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
KLHL13-207ENST00000540167 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
KLHL13-207ENST00000540167 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
KLHL13-207ENST00000540167 APLP2Q06481 763 aa21.6■■□□□ 1.05
KLHL13-207ENST00000540167 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
KLHL13-207ENST00000540167 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
KLHL13-207ENST00000540167 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
KLHL13-207ENST00000540167 SOGA1O94964 1423 aa21.53■■□□□ 1.04
KLHL13-207ENST00000540167 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
KLHL13-207ENST00000540167 ITGAEP38570 1179 aa21.44■■□□□ 1.02
KLHL13-207ENST00000540167 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
KLHL13-207ENST00000540167 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
KLHL13-207ENST00000540167 MIER1Q8N108 512 aa21.37■■□□□ 1.01
KLHL13-207ENST00000540167 SMARCA4P51532 1647 aa21.31■■□□□ 1
KLHL13-207ENST00000540167 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
KLHL13-207ENST00000540167 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
KLHL13-207ENST00000540167 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
KLHL13-207ENST00000540167 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
KLHL13-207ENST00000540167 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
KLHL13-207ENST00000540167 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
KLHL13-207ENST00000540167 MYT1Q01538 1121 aa21.15■□□□□ 0.98
KLHL13-207ENST00000540167 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
KLHL13-207ENST00000540167 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
KLHL13-207ENST00000540167 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
KLHL13-207ENST00000540167 CLIP1P30622 1438 aa20.99■□□□□ 0.95
KLHL13-207ENST00000540167 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
KLHL13-207ENST00000540167 BCANQ96GW7 911 aa20.97■□□□□ 0.95
KLHL13-207ENST00000540167 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
KLHL13-207ENST00000540167 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
KLHL13-207ENST00000540167 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
KLHL13-207ENST00000540167 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
KLHL13-207ENST00000540167 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
KLHL13-207ENST00000540167 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
KLHL13-207ENST00000540167 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
KLHL13-207ENST00000540167 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
KLHL13-207ENST00000540167 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
KLHL13-207ENST00000540167 EEA1Q15075 1411 aa20.77■□□□□ 0.92
KLHL13-207ENST00000540167 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
KLHL13-207ENST00000540167 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
KLHL13-207ENST00000540167 CUX2O14529 1486 aa20.63■□□□□ 0.89
KLHL13-207ENST00000540167 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
KLHL13-207ENST00000540167 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
KLHL13-207ENST00000540167 FBLN2P98095 1184 aa20.6■□□□□ 0.89
KLHL13-207ENST00000540167 FKBP8Q14318 412 aa20.59■□□□□ 0.89
KLHL13-207ENST00000540167 TSHZ2Q9NRE2 1034 aa20.59■□□□□ 0.89
KLHL13-207ENST00000540167 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
KLHL13-207ENST00000540167 DDX10Q13206 875 aaKnown RBP20.55■□□□□ 0.88
KLHL13-207ENST00000540167 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
KLHL13-207ENST00000540167 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
KLHL13-207ENST00000540167 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
KLHL13-207ENST00000540167 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
KLHL13-207ENST00000540167 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
KLHL13-207ENST00000540167 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
KLHL13-207ENST00000540167 NESP48681 1621 aa20.47■□□□□ 0.87
KLHL13-207ENST00000540167 NEFLP07196 543 aa20.46■□□□□ 0.87
KLHL13-207ENST00000540167 CHIC2Q9UKJ5 165 aa20.46■□□□□ 0.87
KLHL13-207ENST00000540167 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
KLHL13-207ENST00000540167 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.86
KLHL13-207ENST00000540167 CUX1P39880 1505 aa20.44■□□□□ 0.86
KLHL13-207ENST00000540167 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
KLHL13-207ENST00000540167 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms