RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
SFMBT1-201ENST00000394752 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
SFMBT1-201ENST00000394752 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
SFMBT1-201ENST00000394752 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
SFMBT1-201ENST00000394752 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
SFMBT1-201ENST00000394752 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
SFMBT1-201ENST00000394752 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.43
SFMBT1-201ENST00000394752 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
SFMBT1-201ENST00000394752 ABCC9O60706 1549 aa23.65■■□□□ 1.38
SFMBT1-201ENST00000394752 FAM9AQ8IZU1 332 aaPredicted RBP23.61■■□□□ 1.37
SFMBT1-201ENST00000394752 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
SFMBT1-201ENST00000394752 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
SFMBT1-201ENST00000394752 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
SFMBT1-201ENST00000394752 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
SFMBT1-201ENST00000394752 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
SFMBT1-201ENST00000394752 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
SFMBT1-201ENST00000394752 NACADO15069 1562 aa22.9■■□□□ 1.26
SFMBT1-201ENST00000394752 PPARGC1BQ86YN6 1023 aaKnown RBP22.87■■□□□ 1.25
SFMBT1-201ENST00000394752 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
SFMBT1-201ENST00000394752 HRCP23327 699 aa22.78■■□□□ 1.24
SFMBT1-201ENST00000394752 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.24
SFMBT1-201ENST00000394752 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
SFMBT1-201ENST00000394752 RANGAP1P46060 587 aaPredicted RBP22.76■■□□□ 1.23
SFMBT1-201ENST00000394752 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
SFMBT1-201ENST00000394752 APLP2Q06481 763 aa22.66■■□□□ 1.22
SFMBT1-201ENST00000394752 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
SFMBT1-201ENST00000394752 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
SFMBT1-201ENST00000394752 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
SFMBT1-201ENST00000394752 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
SFMBT1-201ENST00000394752 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
SFMBT1-201ENST00000394752 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.16
SFMBT1-201ENST00000394752 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
SFMBT1-201ENST00000394752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
SFMBT1-201ENST00000394752 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
SFMBT1-201ENST00000394752 WIZO95785 1651 aa22.11■■□□□ 1.13
SFMBT1-201ENST00000394752 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
SFMBT1-201ENST00000394752 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
SFMBT1-201ENST00000394752 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
SFMBT1-201ENST00000394752 CSRNP3Q8WYN3 585 aa22■■□□□ 1.11
SFMBT1-201ENST00000394752 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
SFMBT1-201ENST00000394752 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
SFMBT1-201ENST00000394752 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
SFMBT1-201ENST00000394752 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
SFMBT1-201ENST00000394752 ITGAEP38570 1179 aa21.87■■□□□ 1.09
SFMBT1-201ENST00000394752 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
SFMBT1-201ENST00000394752 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
SFMBT1-201ENST00000394752 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
SFMBT1-201ENST00000394752 EEA1Q15075 1411 aa21.71■■□□□ 1.07
SFMBT1-201ENST00000394752 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
SFMBT1-201ENST00000394752 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
SFMBT1-201ENST00000394752 SOGA1O94964 1423 aa21.63■■□□□ 1.05
SFMBT1-201ENST00000394752 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
SFMBT1-201ENST00000394752 CEP162Q5TB80 1403 aa21.6■■□□□ 1.05
SFMBT1-201ENST00000394752 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
SFMBT1-201ENST00000394752 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
SFMBT1-201ENST00000394752 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
SFMBT1-201ENST00000394752 CLIP1P30622 1438 aa21.45■■□□□ 1.03
SFMBT1-201ENST00000394752 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
SFMBT1-201ENST00000394752 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
SFMBT1-201ENST00000394752 GTF3C3Q9Y5Q9 886 aa21.32■■□□□ 1
SFMBT1-201ENST00000394752 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
SFMBT1-201ENST00000394752 KIF27Q86VH2 1401 aa21.31■■□□□ 1
SFMBT1-201ENST00000394752 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
SFMBT1-201ENST00000394752 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
SFMBT1-201ENST00000394752 NEFLP07196 543 aa21.25■□□□□ 0.99
SFMBT1-201ENST00000394752 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
SFMBT1-201ENST00000394752 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
SFMBT1-201ENST00000394752 NEUROD1Q13562 356 aa21.2■□□□□ 0.98
SFMBT1-201ENST00000394752 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
SFMBT1-201ENST00000394752 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
SFMBT1-201ENST00000394752 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
SFMBT1-201ENST00000394752 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
SFMBT1-201ENST00000394752 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
SFMBT1-201ENST00000394752 CUX2O14529 1486 aa21.11■□□□□ 0.97
SFMBT1-201ENST00000394752 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
SFMBT1-201ENST00000394752 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
SFMBT1-201ENST00000394752 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
SFMBT1-201ENST00000394752 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.96
SFMBT1-201ENST00000394752 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
SFMBT1-201ENST00000394752 ERICH6Q7L0X2 663 aa21.01■□□□□ 0.95
SFMBT1-201ENST00000394752 CARMIL1Q5VZK9 1371 aa20.99■□□□□ 0.95
SFMBT1-201ENST00000394752 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
SFMBT1-201ENST00000394752 BCANQ96GW7 911 aa20.94■□□□□ 0.94
SFMBT1-201ENST00000394752 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
SFMBT1-201ENST00000394752 CFTRP13569 1480 aa20.92■□□□□ 0.94
SFMBT1-201ENST00000394752 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
SFMBT1-201ENST00000394752 KIF21BO75037 1637 aa20.89■□□□□ 0.94
SFMBT1-201ENST00000394752 FBLN2P98095 1184 aa20.89■□□□□ 0.93
SFMBT1-201ENST00000394752 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
SFMBT1-201ENST00000394752 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
SFMBT1-201ENST00000394752 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
SFMBT1-201ENST00000394752 MIER1Q8N108 512 aa20.82■□□□□ 0.92
SFMBT1-201ENST00000394752 CUX1P39880 1505 aa20.8■□□□□ 0.92
SFMBT1-201ENST00000394752 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
SFMBT1-201ENST00000394752 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
SFMBT1-201ENST00000394752 CC2D2AQ9P2K1 1620 aa20.79■□□□□ 0.92
SFMBT1-201ENST00000394752 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
SFMBT1-201ENST00000394752 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
SFMBT1-201ENST00000394752 IGF1RP08069 1367 aa20.74■□□□□ 0.91
SFMBT1-201ENST00000394752 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms