RNA–Protein interactions for RNA: ENST00000509852.5

MTX3-201, Transcript of metaxin 3, humanhuman

TSL 1 (best) BASIC

Gene MTX3, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTX3-201ENST00000509852 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
MTX3-201ENST00000509852 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
MTX3-201ENST00000509852 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
MTX3-201ENST00000509852 ABCC9O60706 1549 aa30.14■■■□□ 2.42
MTX3-201ENST00000509852 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
MTX3-201ENST00000509852 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
MTX3-201ENST00000509852 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
MTX3-201ENST00000509852 NACADO15069 1562 aa29.57■■■□□ 2.32
MTX3-201ENST00000509852 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
MTX3-201ENST00000509852 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
MTX3-201ENST00000509852 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
MTX3-201ENST00000509852 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
MTX3-201ENST00000509852 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
MTX3-201ENST00000509852 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
MTX3-201ENST00000509852 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
MTX3-201ENST00000509852 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
MTX3-201ENST00000509852 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
MTX3-201ENST00000509852 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
MTX3-201ENST00000509852 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
MTX3-201ENST00000509852 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
MTX3-201ENST00000509852 WIZO95785 1651 aa27.72■■■□□ 2.03
MTX3-201ENST00000509852 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.02
MTX3-201ENST00000509852 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
MTX3-201ENST00000509852 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
MTX3-201ENST00000509852 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
MTX3-201ENST00000509852 TOP2AP11388 1531 aaKnown RBP27.44■■□□□ 1.98
MTX3-201ENST00000509852 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
MTX3-201ENST00000509852 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
MTX3-201ENST00000509852 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
MTX3-201ENST00000509852 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
MTX3-201ENST00000509852 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
MTX3-201ENST00000509852 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
MTX3-201ENST00000509852 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
MTX3-201ENST00000509852 CFTRP13569 1480 aa26.65■■□□□ 1.86
MTX3-201ENST00000509852 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
MTX3-201ENST00000509852 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
MTX3-201ENST00000509852 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
MTX3-201ENST00000509852 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
MTX3-201ENST00000509852 NESP48681 1621 aa26.41■■□□□ 1.82
MTX3-201ENST00000509852 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
MTX3-201ENST00000509852 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
MTX3-201ENST00000509852 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
MTX3-201ENST00000509852 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
MTX3-201ENST00000509852 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
MTX3-201ENST00000509852 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
MTX3-201ENST00000509852 CUX1P39880 1505 aa26.18■■□□□ 1.78
MTX3-201ENST00000509852 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
MTX3-201ENST00000509852 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
MTX3-201ENST00000509852 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
MTX3-201ENST00000509852 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
MTX3-201ENST00000509852 SOGA1O94964 1423 aa25.98■■□□□ 1.75
MTX3-201ENST00000509852 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
MTX3-201ENST00000509852 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
MTX3-201ENST00000509852 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
MTX3-201ENST00000509852 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
MTX3-201ENST00000509852 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
MTX3-201ENST00000509852 EEA1Q15075 1411 aa25.87■■□□□ 1.73
MTX3-201ENST00000509852 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
MTX3-201ENST00000509852 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
MTX3-201ENST00000509852 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.73
MTX3-201ENST00000509852 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
MTX3-201ENST00000509852 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
MTX3-201ENST00000509852 WDR62O43379 1518 aa25.76■■□□□ 1.71
MTX3-201ENST00000509852 RAD54L2Q9Y4B4 1467 aa25.74■■□□□ 1.71
MTX3-201ENST00000509852 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
MTX3-201ENST00000509852 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
MTX3-201ENST00000509852 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
MTX3-201ENST00000509852 CUX2O14529 1486 aa25.69■■□□□ 1.7
MTX3-201ENST00000509852 WDR97A6NE52 1622 aa25.62■■□□□ 1.69
MTX3-201ENST00000509852 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
MTX3-201ENST00000509852 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
MTX3-201ENST00000509852 IGF1RP08069 1367 aa25.54■■□□□ 1.68
MTX3-201ENST00000509852 KIF21BO75037 1637 aa25.54■■□□□ 1.68
MTX3-201ENST00000509852 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
MTX3-201ENST00000509852 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
MTX3-201ENST00000509852 TDRD9Q8NDG6 1382 aaKnown RBP25.51■■□□□ 1.67
MTX3-201ENST00000509852 ABCA5Q8WWZ7 1642 aa25.49■■□□□ 1.67
MTX3-201ENST00000509852 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
MTX3-201ENST00000509852 GAPVD1Q14C86 1478 aa25.45■■□□□ 1.66
MTX3-201ENST00000509852 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.66
MTX3-201ENST00000509852 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
MTX3-201ENST00000509852 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
MTX3-201ENST00000509852 CARMIL1Q5VZK9 1371 aa25.4■■□□□ 1.66
MTX3-201ENST00000509852 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
MTX3-201ENST00000509852 AQRO60306 1485 aaKnown RBP eCLIP25.39■■□□□ 1.66
MTX3-201ENST00000509852 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
MTX3-201ENST00000509852 CUL7Q14999 1698 aa25.32■■□□□ 1.64
MTX3-201ENST00000509852 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
MTX3-201ENST00000509852 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
MTX3-201ENST00000509852 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
MTX3-201ENST00000509852 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
MTX3-201ENST00000509852 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
MTX3-201ENST00000509852 ADAMTS12P58397 1594 aa25.17■■□□□ 1.62
MTX3-201ENST00000509852 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.62
MTX3-201ENST00000509852 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
MTX3-201ENST00000509852 CLIP1P30622 1438 aa25.08■■□□□ 1.6
MTX3-201ENST00000509852 SYNJ2O15056 1496 aa25■■□□□ 1.59
MTX3-201ENST00000509852 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
MTX3-201ENST00000509852 CTTNBP2Q8WZ74 1663 aa24.99■■□□□ 1.59
MTX3-201ENST00000509852 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms