RNA–Protein interactions for RNA: ENST00000329117.9

BCAN-201, Transcript of brevican, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCAN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAN-201ENST00000329117 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
BCAN-201ENST00000329117 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
BCAN-201ENST00000329117 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
BCAN-201ENST00000329117 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
BCAN-201ENST00000329117 HRCP23327 699 aa23.58■■□□□ 1.36
BCAN-201ENST00000329117 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
BCAN-201ENST00000329117 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
BCAN-201ENST00000329117 DCAF8L2P0C7V8 631 aa23.11■■□□□ 1.29
BCAN-201ENST00000329117 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
BCAN-201ENST00000329117 MYT1Q01538 1121 aa23■■□□□ 1.27
BCAN-201ENST00000329117 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
BCAN-201ENST00000329117 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
BCAN-201ENST00000329117 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.24
BCAN-201ENST00000329117 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
BCAN-201ENST00000329117 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
BCAN-201ENST00000329117 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
BCAN-201ENST00000329117 PRKCSHP14314 528 aaPredicted RBP22.27■■□□□ 1.16
BCAN-201ENST00000329117 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
BCAN-201ENST00000329117 BCL11AQ9H165 835 aa22.24■■□□□ 1.15
BCAN-201ENST00000329117 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
BCAN-201ENST00000329117 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
BCAN-201ENST00000329117 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.12
BCAN-201ENST00000329117 TRIM41Q8WV44 630 aa22■■□□□ 1.11
BCAN-201ENST00000329117 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
BCAN-201ENST00000329117 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
BCAN-201ENST00000329117 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
BCAN-201ENST00000329117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
BCAN-201ENST00000329117 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
BCAN-201ENST00000329117 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
BCAN-201ENST00000329117 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
BCAN-201ENST00000329117 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
BCAN-201ENST00000329117 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
BCAN-201ENST00000329117 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
BCAN-201ENST00000329117 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
BCAN-201ENST00000329117 ANP32EQ9BTT0 268 aa21.2■□□□□ 0.98
BCAN-201ENST00000329117 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
BCAN-201ENST00000329117 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
BCAN-201ENST00000329117 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
BCAN-201ENST00000329117 MIER1Q8N108 512 aa21.09■□□□□ 0.97
BCAN-201ENST00000329117 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
BCAN-201ENST00000329117 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.96
BCAN-201ENST00000329117 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
BCAN-201ENST00000329117 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
BCAN-201ENST00000329117 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
BCAN-201ENST00000329117 ABCC9O60706 1549 aa20.92■□□□□ 0.94
BCAN-201ENST00000329117 APLP2Q06481 763 aa20.88■□□□□ 0.93
BCAN-201ENST00000329117 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
BCAN-201ENST00000329117 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
BCAN-201ENST00000329117 BCANQ96GW7 911 aa20.7■□□□□ 0.9
BCAN-201ENST00000329117 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
BCAN-201ENST00000329117 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
BCAN-201ENST00000329117 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
BCAN-201ENST00000329117 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
BCAN-201ENST00000329117 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
BCAN-201ENST00000329117 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
BCAN-201ENST00000329117 SOGA1O94964 1423 aa20.52■□□□□ 0.88
BCAN-201ENST00000329117 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
BCAN-201ENST00000329117 ITGAEP38570 1179 aa20.47■□□□□ 0.87
BCAN-201ENST00000329117 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
BCAN-201ENST00000329117 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
BCAN-201ENST00000329117 RTN4Q9NQC3 1192 aaKnown RBP20.44■□□□□ 0.86
BCAN-201ENST00000329117 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
BCAN-201ENST00000329117 PLEKHG5O94827 1062 aa20.42■□□□□ 0.86
BCAN-201ENST00000329117 WIZO95785 1651 aa20.41■□□□□ 0.86
BCAN-201ENST00000329117 FKBP8Q14318 412 aa20.37■□□□□ 0.85
BCAN-201ENST00000329117 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
BCAN-201ENST00000329117 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
BCAN-201ENST00000329117 NEFLP07196 543 aa20.32■□□□□ 0.84
BCAN-201ENST00000329117 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
BCAN-201ENST00000329117 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
BCAN-201ENST00000329117 CLIP1P30622 1438 aa20.24■□□□□ 0.83
BCAN-201ENST00000329117 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
BCAN-201ENST00000329117 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
BCAN-201ENST00000329117 DEKP35659 375 aaKnown RBP20.18■□□□□ 0.82
BCAN-201ENST00000329117 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
BCAN-201ENST00000329117 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
BCAN-201ENST00000329117 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
BCAN-201ENST00000329117 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
BCAN-201ENST00000329117 EEA1Q15075 1411 aa20.1■□□□□ 0.81
BCAN-201ENST00000329117 NBR1Q14596 966 aa20.09■□□□□ 0.81
BCAN-201ENST00000329117 MSH5O43196 834 aa20.07■□□□□ 0.8
BCAN-201ENST00000329117 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
BCAN-201ENST00000329117 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
BCAN-201ENST00000329117 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
BCAN-201ENST00000329117 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
BCAN-201ENST00000329117 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
BCAN-201ENST00000329117 UBE2Q2Q8WVN8 375 aa20.02■□□□□ 0.8
BCAN-201ENST00000329117 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
BCAN-201ENST00000329117 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
BCAN-201ENST00000329117 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
BCAN-201ENST00000329117 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
BCAN-201ENST00000329117 PKNOX2Q96KN3 472 aa19.95■□□□□ 0.78
BCAN-201ENST00000329117 ANP32CO43423 234 aa19.93■□□□□ 0.78
BCAN-201ENST00000329117 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
BCAN-201ENST00000329117 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
BCAN-201ENST00000329117 PODXL2Q9NZ53 605 aa19.89■□□□□ 0.78
BCAN-201ENST00000329117 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
BCAN-201ENST00000329117 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
BCAN-201ENST00000329117 NACADO15069 1562 aa19.88■□□□□ 0.77
BCAN-201ENST00000329117 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms