RNA–Protein interactions for RNA: ENST00000490355.6

KCNT1-209, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-209ENST00000490355 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
KCNT1-209ENST00000490355 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
KCNT1-209ENST00000490355 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
KCNT1-209ENST00000490355 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
KCNT1-209ENST00000490355 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
KCNT1-209ENST00000490355 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
KCNT1-209ENST00000490355 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
KCNT1-209ENST00000490355 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
KCNT1-209ENST00000490355 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
KCNT1-209ENST00000490355 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
KCNT1-209ENST00000490355 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
KCNT1-209ENST00000490355 HRCP23327 699 aa23.44■■□□□ 1.34
KCNT1-209ENST00000490355 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
KCNT1-209ENST00000490355 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
KCNT1-209ENST00000490355 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
KCNT1-209ENST00000490355 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
KCNT1-209ENST00000490355 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
KCNT1-209ENST00000490355 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
KCNT1-209ENST00000490355 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
KCNT1-209ENST00000490355 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
KCNT1-209ENST00000490355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
KCNT1-209ENST00000490355 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
KCNT1-209ENST00000490355 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
KCNT1-209ENST00000490355 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
KCNT1-209ENST00000490355 APLP2Q06481 763 aa22.24■■□□□ 1.15
KCNT1-209ENST00000490355 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
KCNT1-209ENST00000490355 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
KCNT1-209ENST00000490355 SCRIBQ14160 1630 aa22.08■■□□□ 1.12
KCNT1-209ENST00000490355 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
KCNT1-209ENST00000490355 ABCC9O60706 1549 aa22.04■■□□□ 1.12
KCNT1-209ENST00000490355 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
KCNT1-209ENST00000490355 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
KCNT1-209ENST00000490355 ITGAEP38570 1179 aa21.97■■□□□ 1.11
KCNT1-209ENST00000490355 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
KCNT1-209ENST00000490355 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
KCNT1-209ENST00000490355 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
KCNT1-209ENST00000490355 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
KCNT1-209ENST00000490355 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
KCNT1-209ENST00000490355 NACADO15069 1562 aa21.78■■□□□ 1.08
KCNT1-209ENST00000490355 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
KCNT1-209ENST00000490355 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
KCNT1-209ENST00000490355 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
KCNT1-209ENST00000490355 BCANQ96GW7 911 aa21.52■■□□□ 1.03
KCNT1-209ENST00000490355 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
KCNT1-209ENST00000490355 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
KCNT1-209ENST00000490355 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
KCNT1-209ENST00000490355 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
KCNT1-209ENST00000490355 MIER1Q8N108 512 aa21.4■■□□□ 1.02
KCNT1-209ENST00000490355 WIZO95785 1651 aa21.29■■□□□ 1
KCNT1-209ENST00000490355 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
KCNT1-209ENST00000490355 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
KCNT1-209ENST00000490355 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
KCNT1-209ENST00000490355 NEFLP07196 543 aa21.18■□□□□ 0.98
KCNT1-209ENST00000490355 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
KCNT1-209ENST00000490355 POLR3GLQ9BT43 218 aa21.11■□□□□ 0.97
KCNT1-209ENST00000490355 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
KCNT1-209ENST00000490355 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
KCNT1-209ENST00000490355 SOGA1O94964 1423 aa21■□□□□ 0.95
KCNT1-209ENST00000490355 SMARCA4P51532 1647 aa21■□□□□ 0.95
KCNT1-209ENST00000490355 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
KCNT1-209ENST00000490355 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
KCNT1-209ENST00000490355 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
KCNT1-209ENST00000490355 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
KCNT1-209ENST00000490355 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
KCNT1-209ENST00000490355 MYT1Q01538 1121 aa20.9■□□□□ 0.94
KCNT1-209ENST00000490355 FKBP8Q14318 412 aa20.88■□□□□ 0.93
KCNT1-209ENST00000490355 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
KCNT1-209ENST00000490355 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
KCNT1-209ENST00000490355 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
KCNT1-209ENST00000490355 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
KCNT1-209ENST00000490355 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
KCNT1-209ENST00000490355 CLIP1P30622 1438 aa20.79■□□□□ 0.92
KCNT1-209ENST00000490355 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
KCNT1-209ENST00000490355 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
KCNT1-209ENST00000490355 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
KCNT1-209ENST00000490355 ANP32CO43423 234 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
KCNT1-209ENST00000490355 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
KCNT1-209ENST00000490355 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
KCNT1-209ENST00000490355 EEA1Q15075 1411 aa20.64■□□□□ 0.89
KCNT1-209ENST00000490355 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
KCNT1-209ENST00000490355 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
KCNT1-209ENST00000490355 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
KCNT1-209ENST00000490355 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
KCNT1-209ENST00000490355 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
KCNT1-209ENST00000490355 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
KCNT1-209ENST00000490355 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
KCNT1-209ENST00000490355 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
KCNT1-209ENST00000490355 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
KCNT1-209ENST00000490355 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
KCNT1-209ENST00000490355 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.86
KCNT1-209ENST00000490355 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
KCNT1-209ENST00000490355 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
KCNT1-209ENST00000490355 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
KCNT1-209ENST00000490355 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
KCNT1-209ENST00000490355 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
KCNT1-209ENST00000490355 ZNF777Q9ULD5 760 aaPredicted RBP20.3■□□□□ 0.84
KCNT1-209ENST00000490355 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms