RNA–Protein interactions for RNA: ENST00000309993.2

MSL2-201, Transcript of MSL complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL2, Length 4,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2-201ENST00000309993 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
MSL2-201ENST00000309993 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
MSL2-201ENST00000309993 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
MSL2-201ENST00000309993 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
MSL2-201ENST00000309993 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
MSL2-201ENST00000309993 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
MSL2-201ENST00000309993 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
MSL2-201ENST00000309993 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.17
MSL2-201ENST00000309993 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
MSL2-201ENST00000309993 APLP2Q06481 763 aa22.19■■□□□ 1.14
MSL2-201ENST00000309993 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
MSL2-201ENST00000309993 HRCP23327 699 aa22.04■■□□□ 1.12
MSL2-201ENST00000309993 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
MSL2-201ENST00000309993 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
MSL2-201ENST00000309993 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
MSL2-201ENST00000309993 CENPBP07199 599 aaPredicted RBP21.82■■□□□ 1.08
MSL2-201ENST00000309993 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
MSL2-201ENST00000309993 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
MSL2-201ENST00000309993 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
MSL2-201ENST00000309993 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
MSL2-201ENST00000309993 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
MSL2-201ENST00000309993 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
MSL2-201ENST00000309993 PPARGC1BQ86YN6 1023 aaKnown RBP21.42■■□□□ 1.02
MSL2-201ENST00000309993 ABCC9O60706 1549 aa21.22■□□□□ 0.99
MSL2-201ENST00000309993 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
MSL2-201ENST00000309993 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.98
MSL2-201ENST00000309993 MYT1Q01538 1121 aa21.13■□□□□ 0.97
MSL2-201ENST00000309993 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
MSL2-201ENST00000309993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
MSL2-201ENST00000309993 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
MSL2-201ENST00000309993 NEFLP07196 543 aa20.98■□□□□ 0.95
MSL2-201ENST00000309993 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
MSL2-201ENST00000309993 DIEXFQ68CQ4 756 aaKnown RBP20.96■□□□□ 0.95
MSL2-201ENST00000309993 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
MSL2-201ENST00000309993 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
MSL2-201ENST00000309993 ITGAEP38570 1179 aa20.8■□□□□ 0.92
MSL2-201ENST00000309993 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
MSL2-201ENST00000309993 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
MSL2-201ENST00000309993 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
MSL2-201ENST00000309993 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
MSL2-201ENST00000309993 NACADO15069 1562 aa20.54■□□□□ 0.88
MSL2-201ENST00000309993 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.88
MSL2-201ENST00000309993 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.88
MSL2-201ENST00000309993 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
MSL2-201ENST00000309993 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
MSL2-201ENST00000309993 EEA1Q15075 1411 aa20.44■□□□□ 0.86
MSL2-201ENST00000309993 NEUROD1Q13562 356 aa20.28■□□□□ 0.84
MSL2-201ENST00000309993 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.83
MSL2-201ENST00000309993 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
MSL2-201ENST00000309993 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
MSL2-201ENST00000309993 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
MSL2-201ENST00000309993 ANP32CO43423 234 aa20.24■□□□□ 0.83
MSL2-201ENST00000309993 CLIP1P30622 1438 aa20.22■□□□□ 0.83
MSL2-201ENST00000309993 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
MSL2-201ENST00000309993 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
MSL2-201ENST00000309993 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
MSL2-201ENST00000309993 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.82
MSL2-201ENST00000309993 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.82
MSL2-201ENST00000309993 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
MSL2-201ENST00000309993 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
MSL2-201ENST00000309993 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
MSL2-201ENST00000309993 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
MSL2-201ENST00000309993 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
MSL2-201ENST00000309993 DAXXQ9UER7 740 aaPredicted RBP19.97■□□□□ 0.79
MSL2-201ENST00000309993 BCANQ96GW7 911 aa19.97■□□□□ 0.79
MSL2-201ENST00000309993 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
MSL2-201ENST00000309993 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
MSL2-201ENST00000309993 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
MSL2-201ENST00000309993 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
MSL2-201ENST00000309993 MIER1Q8N108 512 aa19.9■□□□□ 0.78
MSL2-201ENST00000309993 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
MSL2-201ENST00000309993 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
MSL2-201ENST00000309993 SOGA1O94964 1423 aa19.84■□□□□ 0.77
MSL2-201ENST00000309993 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
MSL2-201ENST00000309993 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
MSL2-201ENST00000309993 RTL5Q5HYW3 569 aaPredicted RBP19.81■□□□□ 0.76
MSL2-201ENST00000309993 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
MSL2-201ENST00000309993 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
MSL2-201ENST00000309993 WIZO95785 1651 aa19.76■□□□□ 0.75
MSL2-201ENST00000309993 FKBP8Q14318 412 aa19.75■□□□□ 0.75
MSL2-201ENST00000309993 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
MSL2-201ENST00000309993 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
MSL2-201ENST00000309993 FBLN2P98095 1184 aa19.69■□□□□ 0.74
MSL2-201ENST00000309993 ARID3CA6NKF2 412 aa19.66■□□□□ 0.74
MSL2-201ENST00000309993 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
MSL2-201ENST00000309993 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
MSL2-201ENST00000309993 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
MSL2-201ENST00000309993 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
MSL2-201ENST00000309993 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
MSL2-201ENST00000309993 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
MSL2-201ENST00000309993 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
MSL2-201ENST00000309993 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
MSL2-201ENST00000309993 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
MSL2-201ENST00000309993 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
MSL2-201ENST00000309993 ANP32AP39687 249 aaKnown RBP19.52■□□□□ 0.72
MSL2-201ENST00000309993 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
MSL2-201ENST00000309993 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
MSL2-201ENST00000309993 CUX2O14529 1486 aa19.48■□□□□ 0.71
MSL2-201ENST00000309993 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
MSL2-201ENST00000309993 RRP7BPQ9NSQ0 103 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms