Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AL357140.3-201ENST00000639753 1983 ntBASIC12.09□□□□□ -0.47
NKX6-2Q9C056 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NKX6-2Q9C056 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NKX6-2Q9C056 AC024075.2-201ENST00000598112 1473 ntBASIC12.08□□□□□ -0.47
NKX6-2Q9C056 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.08□□□□□ -0.47
NKX6-2Q9C056 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NKX6-2Q9C056 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 FOSL1P1-201ENST00000511041 816 ntBASIC12.08□□□□□ -0.48
NKX6-2Q9C056 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX6-2Q9C056 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC010536.1-201ENST00000538868 2611 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC027369.3-201ENST00000530465 3707 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms