RNA–Protein interactions for RNA: ENST00000360990.7

KCNIP3-202, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 5 BASIC

Gene KCNIP3, Length 2,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-202ENST00000360990 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
KCNIP3-202ENST00000360990 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
KCNIP3-202ENST00000360990 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
KCNIP3-202ENST00000360990 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
KCNIP3-202ENST00000360990 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
KCNIP3-202ENST00000360990 HRCP23327 699 aa22.25■■□□□ 1.15
KCNIP3-202ENST00000360990 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
KCNIP3-202ENST00000360990 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
KCNIP3-202ENST00000360990 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
KCNIP3-202ENST00000360990 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
KCNIP3-202ENST00000360990 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
KCNIP3-202ENST00000360990 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
KCNIP3-202ENST00000360990 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
KCNIP3-202ENST00000360990 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
KCNIP3-202ENST00000360990 ABCC9O60706 1549 aa21.6■■□□□ 1.05
KCNIP3-202ENST00000360990 NACADO15069 1562 aa21.6■■□□□ 1.05
KCNIP3-202ENST00000360990 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
KCNIP3-202ENST00000360990 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
KCNIP3-202ENST00000360990 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1
KCNIP3-202ENST00000360990 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
KCNIP3-202ENST00000360990 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
KCNIP3-202ENST00000360990 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
KCNIP3-202ENST00000360990 TRIM41Q8WV44 630 aa21■□□□□ 0.95
KCNIP3-202ENST00000360990 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
KCNIP3-202ENST00000360990 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
KCNIP3-202ENST00000360990 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
KCNIP3-202ENST00000360990 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
KCNIP3-202ENST00000360990 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
KCNIP3-202ENST00000360990 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
KCNIP3-202ENST00000360990 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
KCNIP3-202ENST00000360990 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
KCNIP3-202ENST00000360990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
KCNIP3-202ENST00000360990 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
KCNIP3-202ENST00000360990 WIZO95785 1651 aa20.56■□□□□ 0.88
KCNIP3-202ENST00000360990 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
KCNIP3-202ENST00000360990 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
KCNIP3-202ENST00000360990 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
KCNIP3-202ENST00000360990 TTBK1Q5TCY1 1321 aaPredicted RBP20.4■□□□□ 0.86
KCNIP3-202ENST00000360990 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
KCNIP3-202ENST00000360990 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
KCNIP3-202ENST00000360990 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
KCNIP3-202ENST00000360990 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.84
KCNIP3-202ENST00000360990 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
KCNIP3-202ENST00000360990 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
KCNIP3-202ENST00000360990 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
KCNIP3-202ENST00000360990 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
KCNIP3-202ENST00000360990 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
KCNIP3-202ENST00000360990 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
KCNIP3-202ENST00000360990 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
KCNIP3-202ENST00000360990 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
KCNIP3-202ENST00000360990 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
KCNIP3-202ENST00000360990 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.8
KCNIP3-202ENST00000360990 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
KCNIP3-202ENST00000360990 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
KCNIP3-202ENST00000360990 SOGA1O94964 1423 aa19.99■□□□□ 0.79
KCNIP3-202ENST00000360990 UBTFP17480 764 aaKnown RBP19.99■□□□□ 0.79
KCNIP3-202ENST00000360990 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
KCNIP3-202ENST00000360990 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
KCNIP3-202ENST00000360990 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
KCNIP3-202ENST00000360990 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
KCNIP3-202ENST00000360990 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
KCNIP3-202ENST00000360990 MIER1Q8N108 512 aa19.89■□□□□ 0.77
KCNIP3-202ENST00000360990 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
KCNIP3-202ENST00000360990 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
KCNIP3-202ENST00000360990 MYT1Q01538 1121 aa19.78■□□□□ 0.76
KCNIP3-202ENST00000360990 EEA1Q15075 1411 aa19.7■□□□□ 0.74
KCNIP3-202ENST00000360990 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
KCNIP3-202ENST00000360990 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
KCNIP3-202ENST00000360990 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
KCNIP3-202ENST00000360990 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
KCNIP3-202ENST00000360990 APLP2Q06481 763 aa19.58■□□□□ 0.72
KCNIP3-202ENST00000360990 CLIP1P30622 1438 aa19.57■□□□□ 0.72
KCNIP3-202ENST00000360990 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
KCNIP3-202ENST00000360990 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
KCNIP3-202ENST00000360990 CFTRP13569 1480 aa19.52■□□□□ 0.72
KCNIP3-202ENST00000360990 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.71
KCNIP3-202ENST00000360990 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
KCNIP3-202ENST00000360990 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
KCNIP3-202ENST00000360990 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
KCNIP3-202ENST00000360990 KIF21BO75037 1637 aa19.4■□□□□ 0.7
KCNIP3-202ENST00000360990 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
KCNIP3-202ENST00000360990 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
KCNIP3-202ENST00000360990 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
KCNIP3-202ENST00000360990 CUX1P39880 1505 aa19.33■□□□□ 0.69
KCNIP3-202ENST00000360990 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
KCNIP3-202ENST00000360990 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
KCNIP3-202ENST00000360990 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
KCNIP3-202ENST00000360990 ITGAEP38570 1179 aa19.23■□□□□ 0.67
KCNIP3-202ENST00000360990 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
KCNIP3-202ENST00000360990 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
KCNIP3-202ENST00000360990 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
KCNIP3-202ENST00000360990 FANCD2Q9BXW9 1451 aa19.15■□□□□ 0.66
KCNIP3-202ENST00000360990 BCANQ96GW7 911 aa19.12■□□□□ 0.65
KCNIP3-202ENST00000360990 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
KCNIP3-202ENST00000360990 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
KCNIP3-202ENST00000360990 NESP48681 1621 aa19.08■□□□□ 0.65
KCNIP3-202ENST00000360990 RRBP1Q9P2E9 1410 aaKnown RBP19.07■□□□□ 0.64
KCNIP3-202ENST00000360990 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
KCNIP3-202ENST00000360990 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
KCNIP3-202ENST00000360990 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms