RNA–Protein interactions for RNA: ENST00000278064.6

CFAP43-201, Transcript of cilia and flagella associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene CFAP43, Length 2,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43-201ENST00000278064 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
CFAP43-201ENST00000278064 SHROOM4Q9ULL8 1493 aa25.8■■□□□ 1.72
CFAP43-201ENST00000278064 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
CFAP43-201ENST00000278064 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
CFAP43-201ENST00000278064 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
CFAP43-201ENST00000278064 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
CFAP43-201ENST00000278064 ABCC9O60706 1549 aa24.59■■□□□ 1.53
CFAP43-201ENST00000278064 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
CFAP43-201ENST00000278064 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
CFAP43-201ENST00000278064 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
CFAP43-201ENST00000278064 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
CFAP43-201ENST00000278064 NACADO15069 1562 aa23.75■■□□□ 1.39
CFAP43-201ENST00000278064 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.37
CFAP43-201ENST00000278064 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
CFAP43-201ENST00000278064 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
CFAP43-201ENST00000278064 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CFAP43-201ENST00000278064 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
CFAP43-201ENST00000278064 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
CFAP43-201ENST00000278064 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
CFAP43-201ENST00000278064 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
CFAP43-201ENST00000278064 WIZO95785 1651 aa23.23■■□□□ 1.31
CFAP43-201ENST00000278064 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
CFAP43-201ENST00000278064 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
CFAP43-201ENST00000278064 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
CFAP43-201ENST00000278064 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.27
CFAP43-201ENST00000278064 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
CFAP43-201ENST00000278064 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
CFAP43-201ENST00000278064 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
CFAP43-201ENST00000278064 HRCP23327 699 aa22.71■■□□□ 1.23
CFAP43-201ENST00000278064 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
CFAP43-201ENST00000278064 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
CFAP43-201ENST00000278064 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
CFAP43-201ENST00000278064 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
CFAP43-201ENST00000278064 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
CFAP43-201ENST00000278064 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
CFAP43-201ENST00000278064 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
CFAP43-201ENST00000278064 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
CFAP43-201ENST00000278064 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
CFAP43-201ENST00000278064 SOGA1O94964 1423 aa22.39■■□□□ 1.17
CFAP43-201ENST00000278064 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
CFAP43-201ENST00000278064 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
CFAP43-201ENST00000278064 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
CFAP43-201ENST00000278064 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
CFAP43-201ENST00000278064 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
CFAP43-201ENST00000278064 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
CFAP43-201ENST00000278064 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
CFAP43-201ENST00000278064 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
CFAP43-201ENST00000278064 EEA1Q15075 1411 aa22.01■■□□□ 1.11
CFAP43-201ENST00000278064 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
CFAP43-201ENST00000278064 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
CFAP43-201ENST00000278064 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
CFAP43-201ENST00000278064 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
CFAP43-201ENST00000278064 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
CFAP43-201ENST00000278064 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CFAP43-201ENST00000278064 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
CFAP43-201ENST00000278064 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
CFAP43-201ENST00000278064 CFTRP13569 1480 aa21.79■■□□□ 1.08
CFAP43-201ENST00000278064 CUX1P39880 1505 aa21.77■■□□□ 1.08
CFAP43-201ENST00000278064 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
CFAP43-201ENST00000278064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
CFAP43-201ENST00000278064 KIF21BO75037 1637 aa21.73■■□□□ 1.07
CFAP43-201ENST00000278064 NESP48681 1621 aa21.73■■□□□ 1.07
CFAP43-201ENST00000278064 TOP2BQ02880 1626 aa21.72■■□□□ 1.07
CFAP43-201ENST00000278064 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
CFAP43-201ENST00000278064 CLIP1P30622 1438 aa21.66■■□□□ 1.06
CFAP43-201ENST00000278064 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
CFAP43-201ENST00000278064 APLP2Q06481 763 aa21.59■■□□□ 1.05
CFAP43-201ENST00000278064 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
CFAP43-201ENST00000278064 CUX2O14529 1486 aa21.58■■□□□ 1.04
CFAP43-201ENST00000278064 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
CFAP43-201ENST00000278064 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
CFAP43-201ENST00000278064 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
CFAP43-201ENST00000278064 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
CFAP43-201ENST00000278064 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
CFAP43-201ENST00000278064 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
CFAP43-201ENST00000278064 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
CFAP43-201ENST00000278064 IGF1RP08069 1367 aa21.46■■□□□ 1.03
CFAP43-201ENST00000278064 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.03
CFAP43-201ENST00000278064 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
CFAP43-201ENST00000278064 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
CFAP43-201ENST00000278064 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CFAP43-201ENST00000278064 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
CFAP43-201ENST00000278064 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
CFAP43-201ENST00000278064 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
CFAP43-201ENST00000278064 ITGAEP38570 1179 aa21.31■■□□□ 1
CFAP43-201ENST00000278064 ARAP1Q96P48 1450 aa21.31■■□□□ 1
CFAP43-201ENST00000278064 TOPBP1Q92547 1522 aa21.31■■□□□ 1
CFAP43-201ENST00000278064 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
CFAP43-201ENST00000278064 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
CFAP43-201ENST00000278064 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
CFAP43-201ENST00000278064 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
CFAP43-201ENST00000278064 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
CFAP43-201ENST00000278064 LAMC3Q9Y6N6 1575 aa21.14■□□□□ 0.97
CFAP43-201ENST00000278064 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
CFAP43-201ENST00000278064 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
CFAP43-201ENST00000278064 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
CFAP43-201ENST00000278064 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.97
CFAP43-201ENST00000278064 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.96
CFAP43-201ENST00000278064 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
CFAP43-201ENST00000278064 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms