RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
TSPAN4-214ENST00000525201 CCDC180Q9P1Z9 1646 aa38.24■■■■□ 3.71
TSPAN4-214ENST00000525201 ABCC9O60706 1549 aa37.59■■■■□ 3.61
TSPAN4-214ENST00000525201 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
TSPAN4-214ENST00000525201 NACADO15069 1562 aa36.02■■■■□ 3.36
TSPAN4-214ENST00000525201 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.32
TSPAN4-214ENST00000525201 MYO15BQ96JP2 1530 aa35.73■■■■□ 3.31
TSPAN4-214ENST00000525201 ZCCHC6Q5VYS8 1495 aaKnown RBP35.52■■■■□ 3.28
TSPAN4-214ENST00000525201 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
TSPAN4-214ENST00000525201 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
TSPAN4-214ENST00000525201 PABPN1Q86U42 306 aaKnown RBP eCLIP34.99■■■■□ 3.195e-10■■■□□ 17.3
TSPAN4-214ENST00000525201 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
TSPAN4-214ENST00000525201 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
TSPAN4-214ENST00000525201 SCRIBQ14160 1630 aa34.74■■■■□ 3.15
TSPAN4-214ENST00000525201 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
TSPAN4-214ENST00000525201 EIF4G1Q04637 1599 aaKnown RBP34.11■■■■□ 3.05
TSPAN4-214ENST00000525201 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
TSPAN4-214ENST00000525201 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
TSPAN4-214ENST00000525201 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
TSPAN4-214ENST00000525201 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
TSPAN4-214ENST00000525201 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
TSPAN4-214ENST00000525201 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
TSPAN4-214ENST00000525201 ATAD2BQ9ULI0 1458 aa33.11■■■□□ 2.89
TSPAN4-214ENST00000525201 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
TSPAN4-214ENST00000525201 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
TSPAN4-214ENST00000525201 BAZ1BQ9UIG0 1483 aaKnown RBP32.89■■■□□ 2.86
TSPAN4-214ENST00000525201 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
TSPAN4-214ENST00000525201 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
TSPAN4-214ENST00000525201 WIZO95785 1651 aa32.46■■■□□ 2.79
TSPAN4-214ENST00000525201 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
TSPAN4-214ENST00000525201 NESP48681 1621 aa32.37■■■□□ 2.77
TSPAN4-214ENST00000525201 CUX2O14529 1486 aa32.36■■■□□ 2.77
TSPAN4-214ENST00000525201 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
TSPAN4-214ENST00000525201 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
TSPAN4-214ENST00000525201 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
TSPAN4-214ENST00000525201 DNAJC5Q9H3Z4 198 aa32.2■■■□□ 2.75
TSPAN4-214ENST00000525201 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
TSPAN4-214ENST00000525201 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
TSPAN4-214ENST00000525201 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
TSPAN4-214ENST00000525201 CFTRP13569 1480 aa31.92■■■□□ 2.7
TSPAN4-214ENST00000525201 MRC2Q9UBG0 1479 aa31.88■■■□□ 2.69
TSPAN4-214ENST00000525201 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
TSPAN4-214ENST00000525201 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
TSPAN4-214ENST00000525201 WDR62O43379 1518 aa31.78■■■□□ 2.68
TSPAN4-214ENST00000525201 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
TSPAN4-214ENST00000525201 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
TSPAN4-214ENST00000525201 URB2Q14146 1524 aaKnown RBP31.47■■■□□ 2.63
TSPAN4-214ENST00000525201 ABCC8Q09428 1581 aa31.37■■■□□ 2.61
TSPAN4-214ENST00000525201 TOPBP1Q92547 1522 aa31.26■■■□□ 2.59
TSPAN4-214ENST00000525201 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
TSPAN4-214ENST00000525201 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
TSPAN4-214ENST00000525201 IFT140Q96RY7 1462 aa31.22■■■□□ 2.59
TSPAN4-214ENST00000525201 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
TSPAN4-214ENST00000525201 POLA1P09884 1462 aaPredicted RBP30.96■■■□□ 2.55
TSPAN4-214ENST00000525201 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
TSPAN4-214ENST00000525201 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
TSPAN4-214ENST00000525201 OSCARQ8IYS5 282 aa30.89■■■□□ 2.54
TSPAN4-214ENST00000525201 CUX1P39880 1505 aa30.85■■■□□ 2.53
TSPAN4-214ENST00000525201 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
TSPAN4-214ENST00000525201 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
TSPAN4-214ENST00000525201 SOGA1O94964 1423 aa30.84■■■□□ 2.53
TSPAN4-214ENST00000525201 RAD54L2Q9Y4B4 1467 aa30.76■■■□□ 2.52
TSPAN4-214ENST00000525201 AQRO60306 1485 aaKnown RBP eCLIP30.76■■■□□ 2.514e-8■■■■■ 31.9
TSPAN4-214ENST00000525201 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
TSPAN4-214ENST00000525201 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
TSPAN4-214ENST00000525201 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
TSPAN4-214ENST00000525201 GRIN2BQ13224 1484 aa30.57■■■□□ 2.48
TSPAN4-214ENST00000525201 CHD1O14646 1710 aa30.57■■■□□ 2.48
TSPAN4-214ENST00000525201 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
TSPAN4-214ENST00000525201 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
TSPAN4-214ENST00000525201 BIVM-ERCC5R4GMW8 1640 aa30.56■■■□□ 2.48
TSPAN4-214ENST00000525201 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
TSPAN4-214ENST00000525201 SNAPC4Q5SXM2 1469 aa30.54■■■□□ 2.48
TSPAN4-214ENST00000525201 FBLN2P98095 1184 aa30.51■■■□□ 2.47
TSPAN4-214ENST00000525201 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
TSPAN4-214ENST00000525201 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
TSPAN4-214ENST00000525201 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
TSPAN4-214ENST00000525201 ABCA5Q8WWZ7 1642 aa30.46■■■□□ 2.47
TSPAN4-214ENST00000525201 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
TSPAN4-214ENST00000525201 SYNJ2O15056 1496 aa30.42■■■□□ 2.46
TSPAN4-214ENST00000525201 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
TSPAN4-214ENST00000525201 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
TSPAN4-214ENST00000525201 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
TSPAN4-214ENST00000525201 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
TSPAN4-214ENST00000525201 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.43
TSPAN4-214ENST00000525201 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
TSPAN4-214ENST00000525201 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
TSPAN4-214ENST00000525201 FHAD1B1AJZ9 1412 aa30.16■■■□□ 2.42
TSPAN4-214ENST00000525201 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
TSPAN4-214ENST00000525201 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
TSPAN4-214ENST00000525201 CYB5RLQ6IPT4 315 aa30.05■■■□□ 2.4
TSPAN4-214ENST00000525201 NUP160Q12769 1436 aa30.03■■■□□ 2.4
TSPAN4-214ENST00000525201 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
TSPAN4-214ENST00000525201 CEP170Q5SW79 1584 aa29.97■■■□□ 2.39
TSPAN4-214ENST00000525201 CUL7Q14999 1698 aa29.91■■■□□ 2.38
TSPAN4-214ENST00000525201 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
TSPAN4-214ENST00000525201 IGF1RP08069 1367 aa29.82■■■□□ 2.36
TSPAN4-214ENST00000525201 RUSC2Q8N2Y8 1516 aa29.77■■■□□ 2.36
TSPAN4-214ENST00000525201 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
TSPAN4-214ENST00000525201 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms