RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 NISCHQ9Y2I1 1504 aa40.19■■■■■ 4.02
SFN-201ENST00000339276 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
SFN-201ENST00000339276 ABCC9O60706 1549 aa34.55■■■■□ 3.12
SFN-201ENST00000339276 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
SFN-201ENST00000339276 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
SFN-201ENST00000339276 NACADO15069 1562 aa33.37■■■□□ 2.93
SFN-201ENST00000339276 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
SFN-201ENST00000339276 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
SFN-201ENST00000339276 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
SFN-201ENST00000339276 UNC13AQ9UPW8 1703 aa32.67■■■□□ 2.82
SFN-201ENST00000339276 SCRIBQ14160 1630 aa32.55■■■□□ 2.8
SFN-201ENST00000339276 BICRAQ9NZM4 1560 aa32.37■■■□□ 2.77
SFN-201ENST00000339276 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
SFN-201ENST00000339276 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
SFN-201ENST00000339276 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
SFN-201ENST00000339276 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
SFN-201ENST00000339276 CECR2Q9BXF3 1484 aa31.3■■■□□ 2.6
SFN-201ENST00000339276 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
SFN-201ENST00000339276 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
SFN-201ENST00000339276 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
SFN-201ENST00000339276 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
SFN-201ENST00000339276 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
SFN-201ENST00000339276 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
SFN-201ENST00000339276 PEG3Q9GZU2 1588 aa30.81■■■□□ 2.52
SFN-201ENST00000339276 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
SFN-201ENST00000339276 RSF1Q96T23 1441 aaPredicted RBP30.74■■■□□ 2.51
SFN-201ENST00000339276 WIZO95785 1651 aa30.71■■■□□ 2.51
SFN-201ENST00000339276 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
SFN-201ENST00000339276 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
SFN-201ENST00000339276 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
SFN-201ENST00000339276 SUPT5HO00267 1087 aaKnown RBP30.19■■■□□ 2.42
SFN-201ENST00000339276 NESP48681 1621 aa30.01■■■□□ 2.39
SFN-201ENST00000339276 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
SFN-201ENST00000339276 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
SFN-201ENST00000339276 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.38
SFN-201ENST00000339276 CFTRP13569 1480 aa29.8■■■□□ 2.36
SFN-201ENST00000339276 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
SFN-201ENST00000339276 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
SFN-201ENST00000339276 KIF21AQ7Z4S6 1674 aa29.69■■■□□ 2.34
SFN-201ENST00000339276 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
SFN-201ENST00000339276 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
SFN-201ENST00000339276 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
SFN-201ENST00000339276 THOC2Q8NI27 1593 aaKnown RBP29.5■■■□□ 2.31
SFN-201ENST00000339276 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
SFN-201ENST00000339276 WDR62O43379 1518 aa29.32■■■□□ 2.28
SFN-201ENST00000339276 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
SFN-201ENST00000339276 CUX2O14529 1486 aa29.29■■■□□ 2.28
SFN-201ENST00000339276 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
SFN-201ENST00000339276 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
SFN-201ENST00000339276 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
SFN-201ENST00000339276 CUX1P39880 1505 aa29.07■■■□□ 2.24
SFN-201ENST00000339276 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
SFN-201ENST00000339276 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
SFN-201ENST00000339276 POLA1P09884 1462 aaPredicted RBP28.93■■■□□ 2.22
SFN-201ENST00000339276 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
SFN-201ENST00000339276 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
SFN-201ENST00000339276 TOP2BQ02880 1626 aa28.89■■■□□ 2.21
SFN-201ENST00000339276 IFT140Q96RY7 1462 aa28.87■■■□□ 2.21
SFN-201ENST00000339276 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
SFN-201ENST00000339276 RAD54L2Q9Y4B4 1467 aa28.81■■■□□ 2.2
SFN-201ENST00000339276 SOGA1O94964 1423 aa28.78■■■□□ 2.2
SFN-201ENST00000339276 ZNF608Q9ULD9 1512 aaPredicted RBP28.75■■■□□ 2.19
SFN-201ENST00000339276 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
SFN-201ENST00000339276 EIF4G3O43432 1585 aaKnown RBP28.67■■■□□ 2.18
SFN-201ENST00000339276 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
SFN-201ENST00000339276 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
SFN-201ENST00000339276 TDRD9Q8NDG6 1382 aaKnown RBP28.6■■■□□ 2.17
SFN-201ENST00000339276 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
SFN-201ENST00000339276 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
SFN-201ENST00000339276 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
SFN-201ENST00000339276 PBRM1Q86U86 1689 aa28.45■■■□□ 2.14
SFN-201ENST00000339276 GRIN2BQ13224 1484 aa28.42■■■□□ 2.14
SFN-201ENST00000339276 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
SFN-201ENST00000339276 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
SFN-201ENST00000339276 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
SFN-201ENST00000339276 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
SFN-201ENST00000339276 ERICH3Q5RHP9 1530 aa28.29■■■□□ 2.12
SFN-201ENST00000339276 CHD1O14646 1710 aa28.26■■■□□ 2.12
SFN-201ENST00000339276 ADAMTS12P58397 1594 aa28.23■■■□□ 2.11
SFN-201ENST00000339276 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
SFN-201ENST00000339276 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
SFN-201ENST00000339276 FBLN2P98095 1184 aa28.18■■■□□ 2.1
SFN-201ENST00000339276 IGF1RP08069 1367 aa28.16■■■□□ 2.1
SFN-201ENST00000339276 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
SFN-201ENST00000339276 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.09
SFN-201ENST00000339276 CUL7Q14999 1698 aa28.11■■■□□ 2.09
SFN-201ENST00000339276 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
SFN-201ENST00000339276 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
SFN-201ENST00000339276 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
SFN-201ENST00000339276 DNAJC5Q9H3Z4 198 aa27.99■■■□□ 2.07
SFN-201ENST00000339276 EEA1Q15075 1411 aa27.96■■■□□ 2.07
SFN-201ENST00000339276 CEP170Q5SW79 1584 aa27.95■■■□□ 2.06
SFN-201ENST00000339276 CLASP1Q7Z460 1538 aa27.93■■■□□ 2.06
SFN-201ENST00000339276 NUP160Q12769 1436 aa27.93■■■□□ 2.06
SFN-201ENST00000339276 FAM9AQ8IZU1 332 aaPredicted RBP27.91■■■□□ 2.06
SFN-201ENST00000339276 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
SFN-201ENST00000339276 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
SFN-201ENST00000339276 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
SFN-201ENST00000339276 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
SFN-201ENST00000339276 KIAA0586Q9BVV6 1533 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms