RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
ITGA6-202ENST00000409080 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
ITGA6-202ENST00000409080 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
ITGA6-202ENST00000409080 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
ITGA6-202ENST00000409080 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
ITGA6-202ENST00000409080 APLP2Q06481 763 aa22.58■■□□□ 1.2
ITGA6-202ENST00000409080 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
ITGA6-202ENST00000409080 TRIM41Q8WV44 630 aa22■■□□□ 1.11
ITGA6-202ENST00000409080 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
ITGA6-202ENST00000409080 RANGAP1P46060 587 aaPredicted RBP21.83■■□□□ 1.09
ITGA6-202ENST00000409080 ABCC9O60706 1549 aa21.79■■□□□ 1.08
ITGA6-202ENST00000409080 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
ITGA6-202ENST00000409080 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
ITGA6-202ENST00000409080 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
ITGA6-202ENST00000409080 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
ITGA6-202ENST00000409080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
ITGA6-202ENST00000409080 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
ITGA6-202ENST00000409080 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
ITGA6-202ENST00000409080 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
ITGA6-202ENST00000409080 CCER1Q8TC90 406 aaPredicted RBP21.15■□□□□ 0.98
ITGA6-202ENST00000409080 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
ITGA6-202ENST00000409080 FBLN2P98095 1184 aa20.82■□□□□ 0.92
ITGA6-202ENST00000409080 ITGAEP38570 1179 aa20.8■□□□□ 0.92
ITGA6-202ENST00000409080 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
ITGA6-202ENST00000409080 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
ITGA6-202ENST00000409080 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
ITGA6-202ENST00000409080 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
ITGA6-202ENST00000409080 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
ITGA6-202ENST00000409080 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
ITGA6-202ENST00000409080 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
ITGA6-202ENST00000409080 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
ITGA6-202ENST00000409080 POLR3GLQ9BT43 218 aa20.5■□□□□ 0.87
ITGA6-202ENST00000409080 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
ITGA6-202ENST00000409080 NEFLP07196 543 aa20.5■□□□□ 0.87
ITGA6-202ENST00000409080 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
ITGA6-202ENST00000409080 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
ITGA6-202ENST00000409080 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
ITGA6-202ENST00000409080 NPM1P06748 294 aaKnown RBP eCLIP20.39■□□□□ 0.85
ITGA6-202ENST00000409080 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
ITGA6-202ENST00000409080 NACADO15069 1562 aa20.32■□□□□ 0.84
ITGA6-202ENST00000409080 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
ITGA6-202ENST00000409080 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
ITGA6-202ENST00000409080 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
ITGA6-202ENST00000409080 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
ITGA6-202ENST00000409080 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
ITGA6-202ENST00000409080 BCANQ96GW7 911 aa20.14■□□□□ 0.82
ITGA6-202ENST00000409080 ARID3CA6NKF2 412 aa20.14■□□□□ 0.81
ITGA6-202ENST00000409080 CHMP7Q8WUX9 453 aaPredicted RBP20.11■□□□□ 0.81
ITGA6-202ENST00000409080 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
ITGA6-202ENST00000409080 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
ITGA6-202ENST00000409080 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
ITGA6-202ENST00000409080 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
ITGA6-202ENST00000409080 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
ITGA6-202ENST00000409080 STAG3Q9UJ98 1225 aa19.94■□□□□ 0.78
ITGA6-202ENST00000409080 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
ITGA6-202ENST00000409080 HRCP23327 699 aa19.9■□□□□ 0.78
ITGA6-202ENST00000409080 DAXXQ9UER7 740 aaPredicted RBP19.86■□□□□ 0.77
ITGA6-202ENST00000409080 NEFMP07197 916 aa19.84■□□□□ 0.77
ITGA6-202ENST00000409080 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
ITGA6-202ENST00000409080 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
ITGA6-202ENST00000409080 TSPY4P0CV99 314 aa19.77■□□□□ 0.76
ITGA6-202ENST00000409080 TSPY10P0CW01 314 aa19.77■□□□□ 0.76
ITGA6-202ENST00000409080 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
ITGA6-202ENST00000409080 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
ITGA6-202ENST00000409080 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
ITGA6-202ENST00000409080 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
ITGA6-202ENST00000409080 EEA1Q15075 1411 aa19.68■□□□□ 0.74
ITGA6-202ENST00000409080 ANP32CO43423 234 aa19.67■□□□□ 0.74
ITGA6-202ENST00000409080 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
ITGA6-202ENST00000409080 SLC24A1O60721 1099 aa19.66■□□□□ 0.74
ITGA6-202ENST00000409080 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
ITGA6-202ENST00000409080 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
ITGA6-202ENST00000409080 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
ITGA6-202ENST00000409080 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
ITGA6-202ENST00000409080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.736e-8■■□□□ 12
ITGA6-202ENST00000409080 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
ITGA6-202ENST00000409080 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.73
ITGA6-202ENST00000409080 ACIN1Q9UKV3 1341 aaKnown RBP19.55■□□□□ 0.72
ITGA6-202ENST00000409080 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
ITGA6-202ENST00000409080 CLIP1P30622 1438 aa19.52■□□□□ 0.72
ITGA6-202ENST00000409080 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.71
ITGA6-202ENST00000409080 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
ITGA6-202ENST00000409080 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
ITGA6-202ENST00000409080 ARID4BQ4LE39 1312 aaPredicted RBP19.49■□□□□ 0.71
ITGA6-202ENST00000409080 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
ITGA6-202ENST00000409080 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
ITGA6-202ENST00000409080 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
ITGA6-202ENST00000409080 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
ITGA6-202ENST00000409080 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
ITGA6-202ENST00000409080 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
ITGA6-202ENST00000409080 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
ITGA6-202ENST00000409080 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
ITGA6-202ENST00000409080 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
ITGA6-202ENST00000409080 C14orf37Q86TY3 774 aa19.33■□□□□ 0.68
ITGA6-202ENST00000409080 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
ITGA6-202ENST00000409080 CUX2O14529 1486 aa19.29■□□□□ 0.68
ITGA6-202ENST00000409080 CARMIL2Q6F5E8 1435 aa19.26■□□□□ 0.67
ITGA6-202ENST00000409080 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
ITGA6-202ENST00000409080 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
ITGA6-202ENST00000409080 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms