RNA–Protein interactions for RNA: ENST00000290295.7

HOXB13-201, Transcript of homeobox B13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB13, Length 3,467 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB13-201ENST00000290295 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
HOXB13-201ENST00000290295 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
HOXB13-201ENST00000290295 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
HOXB13-201ENST00000290295 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
HOXB13-201ENST00000290295 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
HOXB13-201ENST00000290295 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
HOXB13-201ENST00000290295 HRCP23327 699 aa21.79■■□□□ 1.08
HOXB13-201ENST00000290295 ABCC9O60706 1549 aa21.46■■□□□ 1.03
HOXB13-201ENST00000290295 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
HOXB13-201ENST00000290295 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
HOXB13-201ENST00000290295 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
HOXB13-201ENST00000290295 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
HOXB13-201ENST00000290295 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
HOXB13-201ENST00000290295 EHMT2Q96KQ7 1210 aa21.19■□□□□ 0.98
HOXB13-201ENST00000290295 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
HOXB13-201ENST00000290295 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
HOXB13-201ENST00000290295 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
HOXB13-201ENST00000290295 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
HOXB13-201ENST00000290295 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
HOXB13-201ENST00000290295 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
HOXB13-201ENST00000290295 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
HOXB13-201ENST00000290295 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
HOXB13-201ENST00000290295 NACADO15069 1562 aa20.61■□□□□ 0.89
HOXB13-201ENST00000290295 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
HOXB13-201ENST00000290295 ZEB1P37275 1124 aaPredicted RBP20.58■□□□□ 0.88
HOXB13-201ENST00000290295 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
HOXB13-201ENST00000290295 MYT1Q01538 1121 aa20.49■□□□□ 0.87
HOXB13-201ENST00000290295 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
HOXB13-201ENST00000290295 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
HOXB13-201ENST00000290295 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
HOXB13-201ENST00000290295 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
HOXB13-201ENST00000290295 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
HOXB13-201ENST00000290295 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
HOXB13-201ENST00000290295 WIZO95785 1651 aa20.1■□□□□ 0.81
HOXB13-201ENST00000290295 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
HOXB13-201ENST00000290295 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
HOXB13-201ENST00000290295 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
HOXB13-201ENST00000290295 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
HOXB13-201ENST00000290295 APLP2Q06481 763 aa19.9■□□□□ 0.78
HOXB13-201ENST00000290295 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
HOXB13-201ENST00000290295 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
HOXB13-201ENST00000290295 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
HOXB13-201ENST00000290295 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
HOXB13-201ENST00000290295 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
HOXB13-201ENST00000290295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
HOXB13-201ENST00000290295 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
HOXB13-201ENST00000290295 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
HOXB13-201ENST00000290295 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
HOXB13-201ENST00000290295 SOGA1O94964 1423 aa19.66■□□□□ 0.74
HOXB13-201ENST00000290295 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
HOXB13-201ENST00000290295 YTHDC1Q96MU7 727 aaKnown RBP19.64■□□□□ 0.73
HOXB13-201ENST00000290295 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.73
HOXB13-201ENST00000290295 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
HOXB13-201ENST00000290295 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
HOXB13-201ENST00000290295 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
HOXB13-201ENST00000290295 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
HOXB13-201ENST00000290295 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
HOXB13-201ENST00000290295 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
HOXB13-201ENST00000290295 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
HOXB13-201ENST00000290295 ZNF316A6NFI3 1004 aaPredicted RBP19.42■□□□□ 0.7
HOXB13-201ENST00000290295 EEA1Q15075 1411 aa19.41■□□□□ 0.7
HOXB13-201ENST00000290295 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.7
HOXB13-201ENST00000290295 ITGAEP38570 1179 aa19.38■□□□□ 0.69
HOXB13-201ENST00000290295 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
HOXB13-201ENST00000290295 CLIP1P30622 1438 aa19.31■□□□□ 0.68
HOXB13-201ENST00000290295 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
HOXB13-201ENST00000290295 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
HOXB13-201ENST00000290295 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
HOXB13-201ENST00000290295 MIER1Q8N108 512 aa19.26■□□□□ 0.67
HOXB13-201ENST00000290295 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
HOXB13-201ENST00000290295 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
HOXB13-201ENST00000290295 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
HOXB13-201ENST00000290295 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
HOXB13-201ENST00000290295 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
HOXB13-201ENST00000290295 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
HOXB13-201ENST00000290295 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
HOXB13-201ENST00000290295 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
HOXB13-201ENST00000290295 CUX2O14529 1486 aa19.05■□□□□ 0.64
HOXB13-201ENST00000290295 ANP32EQ9BTT0 268 aa19.04■□□□□ 0.64
HOXB13-201ENST00000290295 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
HOXB13-201ENST00000290295 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
HOXB13-201ENST00000290295 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
HOXB13-201ENST00000290295 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
HOXB13-201ENST00000290295 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
HOXB13-201ENST00000290295 CFTRP13569 1480 aa18.94■□□□□ 0.62
HOXB13-201ENST00000290295 ARID3CA6NKF2 412 aa18.93■□□□□ 0.62
HOXB13-201ENST00000290295 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
HOXB13-201ENST00000290295 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
HOXB13-201ENST00000290295 CUX1P39880 1505 aa18.87■□□□□ 0.61
HOXB13-201ENST00000290295 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
HOXB13-201ENST00000290295 FBLN2P98095 1184 aa18.86■□□□□ 0.61
HOXB13-201ENST00000290295 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
HOXB13-201ENST00000290295 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
HOXB13-201ENST00000290295 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
HOXB13-201ENST00000290295 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.6
HOXB13-201ENST00000290295 IGF1RP08069 1367 aa18.82■□□□□ 0.6
HOXB13-201ENST00000290295 NESP48681 1621 aa18.8■□□□□ 0.6
HOXB13-201ENST00000290295 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
HOXB13-201ENST00000290295 KIF21BO75037 1637 aa18.79■□□□□ 0.6
HOXB13-201ENST00000290295 BCANQ96GW7 911 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms