RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
DYSF-202ENST00000394120 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
DYSF-202ENST00000394120 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
DYSF-202ENST00000394120 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
DYSF-202ENST00000394120 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
DYSF-202ENST00000394120 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
DYSF-202ENST00000394120 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
DYSF-202ENST00000394120 ZEB1P37275 1124 aaPredicted RBP20.25■□□□□ 0.83
DYSF-202ENST00000394120 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
DYSF-202ENST00000394120 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
DYSF-202ENST00000394120 APLP2Q06481 763 aa20.02■□□□□ 0.79
DYSF-202ENST00000394120 HRCP23327 699 aa20.01■□□□□ 0.79
DYSF-202ENST00000394120 MYT1Q01538 1121 aa19.99■□□□□ 0.79
DYSF-202ENST00000394120 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
DYSF-202ENST00000394120 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
DYSF-202ENST00000394120 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
DYSF-202ENST00000394120 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
DYSF-202ENST00000394120 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
DYSF-202ENST00000394120 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
DYSF-202ENST00000394120 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
DYSF-202ENST00000394120 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
DYSF-202ENST00000394120 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
DYSF-202ENST00000394120 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
DYSF-202ENST00000394120 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
DYSF-202ENST00000394120 NEFLP07196 543 aa19.4■□□□□ 0.7
DYSF-202ENST00000394120 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
DYSF-202ENST00000394120 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
DYSF-202ENST00000394120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
DYSF-202ENST00000394120 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
DYSF-202ENST00000394120 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
DYSF-202ENST00000394120 ITGAEP38570 1179 aa18.81■□□□□ 0.6
DYSF-202ENST00000394120 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
DYSF-202ENST00000394120 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
DYSF-202ENST00000394120 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
DYSF-202ENST00000394120 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
DYSF-202ENST00000394120 BCANQ96GW7 911 aa18.55■□□□□ 0.56
DYSF-202ENST00000394120 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
DYSF-202ENST00000394120 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
DYSF-202ENST00000394120 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
DYSF-202ENST00000394120 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
DYSF-202ENST00000394120 NEUROD1Q13562 356 aa18.39■□□□□ 0.54
DYSF-202ENST00000394120 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
DYSF-202ENST00000394120 ANP32CO43423 234 aa18.35■□□□□ 0.53
DYSF-202ENST00000394120 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.52
DYSF-202ENST00000394120 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
DYSF-202ENST00000394120 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
DYSF-202ENST00000394120 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
DYSF-202ENST00000394120 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
DYSF-202ENST00000394120 FKBP8Q14318 412 aa18.13■□□□□ 0.49
DYSF-202ENST00000394120 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
DYSF-202ENST00000394120 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
DYSF-202ENST00000394120 MIER1Q8N108 512 aa18.04■□□□□ 0.48
DYSF-202ENST00000394120 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
DYSF-202ENST00000394120 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
DYSF-202ENST00000394120 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
DYSF-202ENST00000394120 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
DYSF-202ENST00000394120 HNRNPUQ00839 825 aaKnown RBP eCLIP17.89■□□□□ 0.46
DYSF-202ENST00000394120 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
DYSF-202ENST00000394120 ABCC9O60706 1549 aa17.88■□□□□ 0.45
DYSF-202ENST00000394120 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
DYSF-202ENST00000394120 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
DYSF-202ENST00000394120 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
DYSF-202ENST00000394120 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
DYSF-202ENST00000394120 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
DYSF-202ENST00000394120 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
DYSF-202ENST00000394120 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
DYSF-202ENST00000394120 NBR1Q14596 966 aa17.73■□□□□ 0.43
DYSF-202ENST00000394120 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
DYSF-202ENST00000394120 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
DYSF-202ENST00000394120 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
DYSF-202ENST00000394120 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
DYSF-202ENST00000394120 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.42
DYSF-202ENST00000394120 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
DYSF-202ENST00000394120 CLIP1P30622 1438 aa17.63■□□□□ 0.41
DYSF-202ENST00000394120 MRS2Q9HD23 443 aa17.6■□□□□ 0.41
DYSF-202ENST00000394120 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
DYSF-202ENST00000394120 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
DYSF-202ENST00000394120 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
DYSF-202ENST00000394120 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
DYSF-202ENST00000394120 EEA1Q15075 1411 aa17.53■□□□□ 0.4
DYSF-202ENST00000394120 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
DYSF-202ENST00000394120 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
DYSF-202ENST00000394120 GOLGA3Q08378 1498 aa17.5■□□□□ 0.39
DYSF-202ENST00000394120 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
DYSF-202ENST00000394120 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
DYSF-202ENST00000394120 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
DYSF-202ENST00000394120 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
DYSF-202ENST00000394120 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
DYSF-202ENST00000394120 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
DYSF-202ENST00000394120 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
DYSF-202ENST00000394120 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
DYSF-202ENST00000394120 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
DYSF-202ENST00000394120 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
DYSF-202ENST00000394120 NEFMP07197 916 aa17.39■□□□□ 0.37
DYSF-202ENST00000394120 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
DYSF-202ENST00000394120 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
DYSF-202ENST00000394120 FBLN2P98095 1184 aa17.35■□□□□ 0.37
DYSF-202ENST00000394120 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
DYSF-202ENST00000394120 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
DYSF-202ENST00000394120 ARXQ96QS3 562 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms