Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 FUCA1P1-201ENST00000374476 1351 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 AC112504.1-201ENST00000623415 1841 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 AC003102.2-201ENST00000589195 1469 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.52□□□□□ -0.4
HIST2H2BCQ6DN03 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 HMGA1P2-201ENST00000430198 324 ntBASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 AL357143.1-203ENST00000639750 881 ntBASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.52□□□□□ -0.41
HIST2H2BCQ6DN03 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 AC009090.5-201ENST00000624886 2285 ntBASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 GEMIN8P4-201ENST00000380526 729 ntBASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST2H2BCQ6DN03 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms