RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
TFAP2B-202ENST00000393655 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
TFAP2B-202ENST00000393655 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
TFAP2B-202ENST00000393655 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
TFAP2B-202ENST00000393655 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
TFAP2B-202ENST00000393655 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
TFAP2B-202ENST00000393655 APLP2Q06481 763 aa25.58■■□□□ 1.69
TFAP2B-202ENST00000393655 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
TFAP2B-202ENST00000393655 TTBK1Q5TCY1 1321 aaPredicted RBP24.72■■□□□ 1.55
TFAP2B-202ENST00000393655 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
TFAP2B-202ENST00000393655 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
TFAP2B-202ENST00000393655 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
TFAP2B-202ENST00000393655 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
TFAP2B-202ENST00000393655 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.5
TFAP2B-202ENST00000393655 ERICH6Q7L0X2 663 aa24.36■■□□□ 1.49
TFAP2B-202ENST00000393655 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
TFAP2B-202ENST00000393655 ZEB1P37275 1124 aaPredicted RBP24.27■■□□□ 1.48
TFAP2B-202ENST00000393655 CENPBP07199 599 aaPredicted RBP24.25■■□□□ 1.47
TFAP2B-202ENST00000393655 MYT1LQ9UL68 1186 aa24.01■■□□□ 1.43
TFAP2B-202ENST00000393655 NEFLP07196 543 aa24■■□□□ 1.43
TFAP2B-202ENST00000393655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
TFAP2B-202ENST00000393655 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
TFAP2B-202ENST00000393655 YTHDC1Q96MU7 727 aaKnown RBP23.61■■□□□ 1.37
TFAP2B-202ENST00000393655 POLR3GLQ9BT43 218 aa23.56■■□□□ 1.36
TFAP2B-202ENST00000393655 ITGAEP38570 1179 aa23.53■■□□□ 1.36
TFAP2B-202ENST00000393655 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
TFAP2B-202ENST00000393655 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
TFAP2B-202ENST00000393655 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
TFAP2B-202ENST00000393655 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
TFAP2B-202ENST00000393655 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
TFAP2B-202ENST00000393655 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
TFAP2B-202ENST00000393655 MYT1Q01538 1121 aa23.06■■□□□ 1.28
TFAP2B-202ENST00000393655 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
TFAP2B-202ENST00000393655 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
TFAP2B-202ENST00000393655 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
TFAP2B-202ENST00000393655 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
TFAP2B-202ENST00000393655 HRCP23327 699 aa22.91■■□□□ 1.26
TFAP2B-202ENST00000393655 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
TFAP2B-202ENST00000393655 ABCC9O60706 1549 aa22.9■■□□□ 1.26
TFAP2B-202ENST00000393655 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
TFAP2B-202ENST00000393655 FBLN2P98095 1184 aa22.85■■□□□ 1.25
TFAP2B-202ENST00000393655 ZBTB47Q9UFB7 747 aaPredicted RBP22.74■■□□□ 1.23
TFAP2B-202ENST00000393655 BCANQ96GW7 911 aa22.7■■□□□ 1.22
TFAP2B-202ENST00000393655 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
TFAP2B-202ENST00000393655 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
TFAP2B-202ENST00000393655 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
TFAP2B-202ENST00000393655 NEFMP07197 916 aa22.61■■□□□ 1.21
TFAP2B-202ENST00000393655 SLC24A1O60721 1099 aa22.6■■□□□ 1.21
TFAP2B-202ENST00000393655 DIEXFQ68CQ4 756 aaKnown RBP22.53■■□□□ 1.2
TFAP2B-202ENST00000393655 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
TFAP2B-202ENST00000393655 ANP32CO43423 234 aa22.51■■□□□ 1.19
TFAP2B-202ENST00000393655 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
TFAP2B-202ENST00000393655 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
TFAP2B-202ENST00000393655 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
TFAP2B-202ENST00000393655 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
TFAP2B-202ENST00000393655 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
TFAP2B-202ENST00000393655 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
TFAP2B-202ENST00000393655 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
TFAP2B-202ENST00000393655 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
TFAP2B-202ENST00000393655 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
TFAP2B-202ENST00000393655 CSRNP3Q8WYN3 585 aa22.16■■□□□ 1.14
TFAP2B-202ENST00000393655 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
TFAP2B-202ENST00000393655 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
TFAP2B-202ENST00000393655 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
TFAP2B-202ENST00000393655 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
TFAP2B-202ENST00000393655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
TFAP2B-202ENST00000393655 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
TFAP2B-202ENST00000393655 HSP90AA1P07900 732 aaKnown RBP21.83■■□□□ 1.08
TFAP2B-202ENST00000393655 TSPY4P0CV99 314 aa21.82■■□□□ 1.08
TFAP2B-202ENST00000393655 TSPY10P0CW01 314 aa21.82■■□□□ 1.08
TFAP2B-202ENST00000393655 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
TFAP2B-202ENST00000393655 UPF2Q9HAU5 1272 aaKnown RBP21.82■■□□□ 1.08
TFAP2B-202ENST00000393655 ANP32BQ92688 251 aaKnown RBP21.81■■□□□ 1.08
TFAP2B-202ENST00000393655 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
TFAP2B-202ENST00000393655 NPM2Q86SE8 214 aaKnown RBP21.75■■□□□ 1.07
TFAP2B-202ENST00000393655 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
TFAP2B-202ENST00000393655 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
TFAP2B-202ENST00000393655 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
TFAP2B-202ENST00000393655 A0A0G2JS52 829 aa21.69■■□□□ 1.06
TFAP2B-202ENST00000393655 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
TFAP2B-202ENST00000393655 MTUS2Q5JR59 1369 aa21.66■■□□□ 1.06
TFAP2B-202ENST00000393655 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
TFAP2B-202ENST00000393655 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
TFAP2B-202ENST00000393655 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
TFAP2B-202ENST00000393655 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
TFAP2B-202ENST00000393655 KDM2AQ9Y2K7 1162 aa21.61■■□□□ 1.05
TFAP2B-202ENST00000393655 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
TFAP2B-202ENST00000393655 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
TFAP2B-202ENST00000393655 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
TFAP2B-202ENST00000393655 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
TFAP2B-202ENST00000393655 HAP1P54257 671 aaPredicted RBP21.52■■□□□ 1.04
TFAP2B-202ENST00000393655 FKBP8Q14318 412 aa21.51■■□□□ 1.03
TFAP2B-202ENST00000393655 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
TFAP2B-202ENST00000393655 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
TFAP2B-202ENST00000393655 PLEKHD1A6NEE1 506 aa21.51■■□□□ 1.03
TFAP2B-202ENST00000393655 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
TFAP2B-202ENST00000393655 CDK11BP21127 795 aaKnown RBP21.48■■□□□ 1.03
TFAP2B-202ENST00000393655 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
TFAP2B-202ENST00000393655 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
TFAP2B-202ENST00000393655 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms