RNA–Protein interactions for RNA: ENST00000374419.1

IFNLR1-204, Transcript of interferon lambda receptor 1, humanhuman

TSL 5 BASIC

Gene IFNLR1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNLR1-204ENST00000374419 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
IFNLR1-204ENST00000374419 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
IFNLR1-204ENST00000374419 ABCC9O60706 1549 aa29.34■■■□□ 2.29
IFNLR1-204ENST00000374419 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
IFNLR1-204ENST00000374419 NACADO15069 1562 aa27.91■■■□□ 2.06
IFNLR1-204ENST00000374419 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
IFNLR1-204ENST00000374419 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
IFNLR1-204ENST00000374419 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
IFNLR1-204ENST00000374419 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
IFNLR1-204ENST00000374419 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
IFNLR1-204ENST00000374419 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
IFNLR1-204ENST00000374419 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
IFNLR1-204ENST00000374419 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
IFNLR1-204ENST00000374419 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
IFNLR1-204ENST00000374419 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
IFNLR1-204ENST00000374419 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
IFNLR1-204ENST00000374419 EIF4G1Q04637 1599 aaKnown RBP26.57■■□□□ 1.84
IFNLR1-204ENST00000374419 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
IFNLR1-204ENST00000374419 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
IFNLR1-204ENST00000374419 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
IFNLR1-204ENST00000374419 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
IFNLR1-204ENST00000374419 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
IFNLR1-204ENST00000374419 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
IFNLR1-204ENST00000374419 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
IFNLR1-204ENST00000374419 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
IFNLR1-204ENST00000374419 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
IFNLR1-204ENST00000374419 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
IFNLR1-204ENST00000374419 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
IFNLR1-204ENST00000374419 NESP48681 1621 aa25.28■■□□□ 1.64
IFNLR1-204ENST00000374419 WIZO95785 1651 aa25.23■■□□□ 1.63
IFNLR1-204ENST00000374419 CUX2O14529 1486 aa25.21■■□□□ 1.63
IFNLR1-204ENST00000374419 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
IFNLR1-204ENST00000374419 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
IFNLR1-204ENST00000374419 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
IFNLR1-204ENST00000374419 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
IFNLR1-204ENST00000374419 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
IFNLR1-204ENST00000374419 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
IFNLR1-204ENST00000374419 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
IFNLR1-204ENST00000374419 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
IFNLR1-204ENST00000374419 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
IFNLR1-204ENST00000374419 WDR62O43379 1518 aa24.74■■□□□ 1.55
IFNLR1-204ENST00000374419 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
IFNLR1-204ENST00000374419 CFTRP13569 1480 aa24.71■■□□□ 1.55
IFNLR1-204ENST00000374419 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.55
IFNLR1-204ENST00000374419 FANCD2Q9BXW9 1451 aa24.68■■□□□ 1.54
IFNLR1-204ENST00000374419 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
IFNLR1-204ENST00000374419 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
IFNLR1-204ENST00000374419 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
IFNLR1-204ENST00000374419 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
IFNLR1-204ENST00000374419 IFT140Q96RY7 1462 aa24.18■■□□□ 1.46
IFNLR1-204ENST00000374419 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
IFNLR1-204ENST00000374419 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
IFNLR1-204ENST00000374419 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
IFNLR1-204ENST00000374419 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
IFNLR1-204ENST00000374419 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
IFNLR1-204ENST00000374419 CHD1O14646 1710 aa23.94■■□□□ 1.42
IFNLR1-204ENST00000374419 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
IFNLR1-204ENST00000374419 CUX1P39880 1505 aa23.94■■□□□ 1.42
IFNLR1-204ENST00000374419 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
IFNLR1-204ENST00000374419 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
IFNLR1-204ENST00000374419 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
IFNLR1-204ENST00000374419 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
IFNLR1-204ENST00000374419 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
IFNLR1-204ENST00000374419 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
IFNLR1-204ENST00000374419 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
IFNLR1-204ENST00000374419 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
IFNLR1-204ENST00000374419 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
IFNLR1-204ENST00000374419 SOGA1O94964 1423 aa23.82■■□□□ 1.4
IFNLR1-204ENST00000374419 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
IFNLR1-204ENST00000374419 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
IFNLR1-204ENST00000374419 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
IFNLR1-204ENST00000374419 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
IFNLR1-204ENST00000374419 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
IFNLR1-204ENST00000374419 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
IFNLR1-204ENST00000374419 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
IFNLR1-204ENST00000374419 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
IFNLR1-204ENST00000374419 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
IFNLR1-204ENST00000374419 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
IFNLR1-204ENST00000374419 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
IFNLR1-204ENST00000374419 FBLN2P98095 1184 aa23.6■■□□□ 1.37
IFNLR1-204ENST00000374419 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
IFNLR1-204ENST00000374419 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
IFNLR1-204ENST00000374419 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
IFNLR1-204ENST00000374419 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
IFNLR1-204ENST00000374419 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
IFNLR1-204ENST00000374419 CHMP7Q8WUX9 453 aaPredicted RBP23.47■■□□□ 1.35
IFNLR1-204ENST00000374419 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
IFNLR1-204ENST00000374419 GRIN2AQ12879 1464 aa23.38■■□□□ 1.33
IFNLR1-204ENST00000374419 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
IFNLR1-204ENST00000374419 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
IFNLR1-204ENST00000374419 CEP170Q5SW79 1584 aa23.33■■□□□ 1.33
IFNLR1-204ENST00000374419 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
IFNLR1-204ENST00000374419 NUP160Q12769 1436 aa23.28■■□□□ 1.32
IFNLR1-204ENST00000374419 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
IFNLR1-204ENST00000374419 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
IFNLR1-204ENST00000374419 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
IFNLR1-204ENST00000374419 CUL7Q14999 1698 aa23.12■■□□□ 1.29
IFNLR1-204ENST00000374419 KIF27Q86VH2 1401 aa23.07■■□□□ 1.28
IFNLR1-204ENST00000374419 TRHP20396 242 aaPredicted RBP23.04■■□□□ 1.28
IFNLR1-204ENST00000374419 IGF1RP08069 1367 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms