RNA–Protein interactions for RNA: ENST00000402045.5

LFNG-204, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 2,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-204ENST00000402045 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
LFNG-204ENST00000402045 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
LFNG-204ENST00000402045 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
LFNG-204ENST00000402045 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
LFNG-204ENST00000402045 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
LFNG-204ENST00000402045 ABCC9O60706 1549 aa29.31■■■□□ 2.28
LFNG-204ENST00000402045 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
LFNG-204ENST00000402045 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
LFNG-204ENST00000402045 NACADO15069 1562 aa28.96■■■□□ 2.23
LFNG-204ENST00000402045 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
LFNG-204ENST00000402045 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
LFNG-204ENST00000402045 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
LFNG-204ENST00000402045 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
LFNG-204ENST00000402045 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.04
LFNG-204ENST00000402045 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
LFNG-204ENST00000402045 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
LFNG-204ENST00000402045 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
LFNG-204ENST00000402045 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
LFNG-204ENST00000402045 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
LFNG-204ENST00000402045 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
LFNG-204ENST00000402045 WIZO95785 1651 aa27.43■■□□□ 1.98
LFNG-204ENST00000402045 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
LFNG-204ENST00000402045 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
LFNG-204ENST00000402045 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
LFNG-204ENST00000402045 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
LFNG-204ENST00000402045 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
LFNG-204ENST00000402045 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
LFNG-204ENST00000402045 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
LFNG-204ENST00000402045 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
LFNG-204ENST00000402045 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
LFNG-204ENST00000402045 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
LFNG-204ENST00000402045 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
LFNG-204ENST00000402045 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
LFNG-204ENST00000402045 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
LFNG-204ENST00000402045 CFTRP13569 1480 aa26.19■■□□□ 1.78
LFNG-204ENST00000402045 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
LFNG-204ENST00000402045 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
LFNG-204ENST00000402045 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
LFNG-204ENST00000402045 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
LFNG-204ENST00000402045 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
LFNG-204ENST00000402045 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
LFNG-204ENST00000402045 TOP2BQ02880 1626 aa25.95■■□□□ 1.75
LFNG-204ENST00000402045 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
LFNG-204ENST00000402045 SOGA1O94964 1423 aa25.9■■□□□ 1.74
LFNG-204ENST00000402045 EEA1Q15075 1411 aa25.87■■□□□ 1.73
LFNG-204ENST00000402045 CUX1P39880 1505 aa25.86■■□□□ 1.73
LFNG-204ENST00000402045 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
LFNG-204ENST00000402045 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
LFNG-204ENST00000402045 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
LFNG-204ENST00000402045 NESP48681 1621 aa25.78■■□□□ 1.72
LFNG-204ENST00000402045 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
LFNG-204ENST00000402045 CSRNP3Q8WYN3 585 aa25.69■■□□□ 1.7
LFNG-204ENST00000402045 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
LFNG-204ENST00000402045 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
LFNG-204ENST00000402045 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
LFNG-204ENST00000402045 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
LFNG-204ENST00000402045 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
LFNG-204ENST00000402045 KIF21BO75037 1637 aa25.54■■□□□ 1.68
LFNG-204ENST00000402045 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
LFNG-204ENST00000402045 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
LFNG-204ENST00000402045 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
LFNG-204ENST00000402045 KIF21AQ7Z4S6 1674 aa25.47■■□□□ 1.67
LFNG-204ENST00000402045 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
LFNG-204ENST00000402045 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
LFNG-204ENST00000402045 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
LFNG-204ENST00000402045 CUX2O14529 1486 aa25.4■■□□□ 1.66
LFNG-204ENST00000402045 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
LFNG-204ENST00000402045 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
LFNG-204ENST00000402045 UBTFP17480 764 aaKnown RBP25.36■■□□□ 1.65
LFNG-204ENST00000402045 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
LFNG-204ENST00000402045 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
LFNG-204ENST00000402045 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.64
LFNG-204ENST00000402045 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
LFNG-204ENST00000402045 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
LFNG-204ENST00000402045 IGF1RP08069 1367 aa25.25■■□□□ 1.63
LFNG-204ENST00000402045 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
LFNG-204ENST00000402045 WDR62O43379 1518 aa25.14■■□□□ 1.61
LFNG-204ENST00000402045 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
LFNG-204ENST00000402045 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
LFNG-204ENST00000402045 CLIP1P30622 1438 aa25.12■■□□□ 1.61
LFNG-204ENST00000402045 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
LFNG-204ENST00000402045 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
LFNG-204ENST00000402045 CUL7Q14999 1698 aa25.06■■□□□ 1.6
LFNG-204ENST00000402045 PCGF6Q9BYE7 350 aa25.05■■□□□ 1.6
LFNG-204ENST00000402045 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
LFNG-204ENST00000402045 GAPVD1Q14C86 1478 aa25.04■■□□□ 1.6
LFNG-204ENST00000402045 THOC2Q8NI27 1593 aaKnown RBP25.03■■□□□ 1.6
LFNG-204ENST00000402045 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
LFNG-204ENST00000402045 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
LFNG-204ENST00000402045 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
LFNG-204ENST00000402045 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
LFNG-204ENST00000402045 PBRM1Q86U86 1689 aa24.89■■□□□ 1.57
LFNG-204ENST00000402045 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
LFNG-204ENST00000402045 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
LFNG-204ENST00000402045 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
LFNG-204ENST00000402045 ARHGAP35Q9NRY4 1499 aa24.83■■□□□ 1.57
LFNG-204ENST00000402045 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
LFNG-204ENST00000402045 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
LFNG-204ENST00000402045 CTTNBP2Q8WZ74 1663 aa24.79■■□□□ 1.56
LFNG-204ENST00000402045 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms