RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
CDH16-207ENST00000568632 CCDC180Q9P1Z9 1646 aa30.37■■■□□ 2.45
CDH16-207ENST00000568632 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.27
CDH16-207ENST00000568632 ABCC9O60706 1549 aa29.07■■■□□ 2.24
CDH16-207ENST00000568632 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
CDH16-207ENST00000568632 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
CDH16-207ENST00000568632 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
CDH16-207ENST00000568632 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
CDH16-207ENST00000568632 NACADO15069 1562 aa28.35■■■□□ 2.13
CDH16-207ENST00000568632 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
CDH16-207ENST00000568632 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
CDH16-207ENST00000568632 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
CDH16-207ENST00000568632 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
CDH16-207ENST00000568632 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
CDH16-207ENST00000568632 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
CDH16-207ENST00000568632 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
CDH16-207ENST00000568632 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
CDH16-207ENST00000568632 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
CDH16-207ENST00000568632 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
CDH16-207ENST00000568632 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
CDH16-207ENST00000568632 WIZO95785 1651 aa26.72■■□□□ 1.87
CDH16-207ENST00000568632 EIF4G1Q04637 1599 aaKnown RBP26.57■■□□□ 1.84
CDH16-207ENST00000568632 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
CDH16-207ENST00000568632 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
CDH16-207ENST00000568632 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
CDH16-207ENST00000568632 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
CDH16-207ENST00000568632 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
CDH16-207ENST00000568632 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
CDH16-207ENST00000568632 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
CDH16-207ENST00000568632 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
CDH16-207ENST00000568632 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
CDH16-207ENST00000568632 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
CDH16-207ENST00000568632 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
CDH16-207ENST00000568632 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
CDH16-207ENST00000568632 CFTRP13569 1480 aa25.58■■□□□ 1.69
CDH16-207ENST00000568632 TRIM41Q8WV44 630 aa25.58■■□□□ 1.68
CDH16-207ENST00000568632 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
CDH16-207ENST00000568632 NESP48681 1621 aa25.47■■□□□ 1.67
CDH16-207ENST00000568632 HRCP23327 699 aa25.42■■□□□ 1.66
CDH16-207ENST00000568632 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.65
CDH16-207ENST00000568632 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
CDH16-207ENST00000568632 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
CDH16-207ENST00000568632 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
CDH16-207ENST00000568632 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
CDH16-207ENST00000568632 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
CDH16-207ENST00000568632 CUX1P39880 1505 aa25.19■■□□□ 1.62
CDH16-207ENST00000568632 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
CDH16-207ENST00000568632 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
CDH16-207ENST00000568632 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
CDH16-207ENST00000568632 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
CDH16-207ENST00000568632 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
CDH16-207ENST00000568632 SOGA1O94964 1423 aa25.07■■□□□ 1.6
CDH16-207ENST00000568632 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
CDH16-207ENST00000568632 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
CDH16-207ENST00000568632 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
CDH16-207ENST00000568632 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
CDH16-207ENST00000568632 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
CDH16-207ENST00000568632 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.59
CDH16-207ENST00000568632 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
CDH16-207ENST00000568632 PCGF6Q9BYE7 350 aa24.92■■□□□ 1.58
CDH16-207ENST00000568632 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
CDH16-207ENST00000568632 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
CDH16-207ENST00000568632 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
CDH16-207ENST00000568632 EEA1Q15075 1411 aa24.83■■□□□ 1.56
CDH16-207ENST00000568632 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
CDH16-207ENST00000568632 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
CDH16-207ENST00000568632 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
CDH16-207ENST00000568632 CUX2O14529 1486 aa24.76■■□□□ 1.55
CDH16-207ENST00000568632 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
CDH16-207ENST00000568632 WDR62O43379 1518 aa24.72■■□□□ 1.55
CDH16-207ENST00000568632 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
CDH16-207ENST00000568632 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
CDH16-207ENST00000568632 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
CDH16-207ENST00000568632 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
CDH16-207ENST00000568632 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
CDH16-207ENST00000568632 IGF1RP08069 1367 aa24.56■■□□□ 1.52
CDH16-207ENST00000568632 KIF21BO75037 1637 aa24.56■■□□□ 1.52
CDH16-207ENST00000568632 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
CDH16-207ENST00000568632 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
CDH16-207ENST00000568632 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
CDH16-207ENST00000568632 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
CDH16-207ENST00000568632 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
CDH16-207ENST00000568632 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CDH16-207ENST00000568632 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
CDH16-207ENST00000568632 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
CDH16-207ENST00000568632 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.51
CDH16-207ENST00000568632 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
CDH16-207ENST00000568632 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
CDH16-207ENST00000568632 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
CDH16-207ENST00000568632 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
CDH16-207ENST00000568632 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
CDH16-207ENST00000568632 CEP162Q5TB80 1403 aa24.33■■□□□ 1.49
CDH16-207ENST00000568632 CUL7Q14999 1698 aa24.33■■□□□ 1.48
CDH16-207ENST00000568632 RANGAP1P46060 587 aaPredicted RBP24.32■■□□□ 1.48
CDH16-207ENST00000568632 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
CDH16-207ENST00000568632 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
CDH16-207ENST00000568632 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
CDH16-207ENST00000568632 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
CDH16-207ENST00000568632 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
CDH16-207ENST00000568632 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms