RNA–Protein interactions for RNA: ENST00000345383.9

TTC8-202, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 5 BASIC

Gene TTC8, Length 2,329 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-202ENST00000345383 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
TTC8-202ENST00000345383 CCDC180Q9P1Z9 1646 aa31.21■■■□□ 2.59
TTC8-202ENST00000345383 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
TTC8-202ENST00000345383 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
TTC8-202ENST00000345383 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
TTC8-202ENST00000345383 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
TTC8-202ENST00000345383 DCAF1Q9Y4B6 1507 aa30■■■□□ 2.39
TTC8-202ENST00000345383 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
TTC8-202ENST00000345383 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
TTC8-202ENST00000345383 SCRIBQ14160 1630 aa29.13■■■□□ 2.25
TTC8-202ENST00000345383 ABCC9O60706 1549 aa29.1■■■□□ 2.25
TTC8-202ENST00000345383 NACADO15069 1562 aa28.84■■■□□ 2.21
TTC8-202ENST00000345383 RSF1Q96T23 1441 aaPredicted RBP28.79■■■□□ 2.2
TTC8-202ENST00000345383 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.16
TTC8-202ENST00000345383 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
TTC8-202ENST00000345383 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
TTC8-202ENST00000345383 MROH2BQ7Z745 1585 aa28.34■■■□□ 2.13
TTC8-202ENST00000345383 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
TTC8-202ENST00000345383 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
TTC8-202ENST00000345383 WIZO95785 1651 aa28.21■■■□□ 2.11
TTC8-202ENST00000345383 HRCP23327 699 aa28.2■■■□□ 2.11
TTC8-202ENST00000345383 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
TTC8-202ENST00000345383 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
TTC8-202ENST00000345383 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
TTC8-202ENST00000345383 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
TTC8-202ENST00000345383 TRIM26Q12899 539 aaPredicted RBP27.83■■■□□ 2.05
TTC8-202ENST00000345383 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
TTC8-202ENST00000345383 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
TTC8-202ENST00000345383 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
TTC8-202ENST00000345383 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
TTC8-202ENST00000345383 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
TTC8-202ENST00000345383 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
TTC8-202ENST00000345383 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
TTC8-202ENST00000345383 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
TTC8-202ENST00000345383 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
TTC8-202ENST00000345383 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
TTC8-202ENST00000345383 ZEB1P37275 1124 aaPredicted RBP27.2■■□□□ 1.94
TTC8-202ENST00000345383 SOGA1O94964 1423 aa27.18■■□□□ 1.94
TTC8-202ENST00000345383 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
TTC8-202ENST00000345383 EEA1Q15075 1411 aa27.11■■□□□ 1.93
TTC8-202ENST00000345383 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
TTC8-202ENST00000345383 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
TTC8-202ENST00000345383 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
TTC8-202ENST00000345383 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
TTC8-202ENST00000345383 CEP162Q5TB80 1403 aa27.02■■□□□ 1.92
TTC8-202ENST00000345383 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
TTC8-202ENST00000345383 SYNJ1O43426 1573 aa26.95■■□□□ 1.9
TTC8-202ENST00000345383 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
TTC8-202ENST00000345383 GOLGA3Q08378 1498 aa26.91■■□□□ 1.9
TTC8-202ENST00000345383 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
TTC8-202ENST00000345383 KIF21BO75037 1637 aa26.76■■□□□ 1.87
TTC8-202ENST00000345383 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
TTC8-202ENST00000345383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.86
TTC8-202ENST00000345383 HMGXB3Q12766 1538 aa26.67■■□□□ 1.86
TTC8-202ENST00000345383 TOP2BQ02880 1626 aa26.67■■□□□ 1.86
TTC8-202ENST00000345383 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
TTC8-202ENST00000345383 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
TTC8-202ENST00000345383 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
TTC8-202ENST00000345383 CLIP1P30622 1438 aa26.56■■□□□ 1.84
TTC8-202ENST00000345383 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
TTC8-202ENST00000345383 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
TTC8-202ENST00000345383 CUX1P39880 1505 aa26.41■■□□□ 1.82
TTC8-202ENST00000345383 CFTRP13569 1480 aa26.38■■□□□ 1.81
TTC8-202ENST00000345383 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
TTC8-202ENST00000345383 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
TTC8-202ENST00000345383 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
TTC8-202ENST00000345383 APLP2Q06481 763 aa26.32■■□□□ 1.8
TTC8-202ENST00000345383 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
TTC8-202ENST00000345383 KIF27Q86VH2 1401 aa26.27■■□□□ 1.8
TTC8-202ENST00000345383 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.78
TTC8-202ENST00000345383 ARAP1Q96P48 1450 aa26.15■■□□□ 1.78
TTC8-202ENST00000345383 CADPSQ9ULU8 1353 aa26.11■■□□□ 1.77
TTC8-202ENST00000345383 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
TTC8-202ENST00000345383 DIEXFQ68CQ4 756 aaKnown RBP26.04■■□□□ 1.76
TTC8-202ENST00000345383 CUX2O14529 1486 aa26.03■■□□□ 1.76
TTC8-202ENST00000345383 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
TTC8-202ENST00000345383 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
TTC8-202ENST00000345383 IGF1RP08069 1367 aa25.94■■□□□ 1.74
TTC8-202ENST00000345383 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
TTC8-202ENST00000345383 ZNF316A6NFI3 1004 aaPredicted RBP25.92■■□□□ 1.74
TTC8-202ENST00000345383 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
TTC8-202ENST00000345383 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
TTC8-202ENST00000345383 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
TTC8-202ENST00000345383 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
TTC8-202ENST00000345383 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
TTC8-202ENST00000345383 ACIN1Q9UKV3 1341 aaKnown RBP25.71■■□□□ 1.71
TTC8-202ENST00000345383 NESP48681 1621 aa25.7■■□□□ 1.7
TTC8-202ENST00000345383 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
TTC8-202ENST00000345383 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
TTC8-202ENST00000345383 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
TTC8-202ENST00000345383 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
TTC8-202ENST00000345383 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
TTC8-202ENST00000345383 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
TTC8-202ENST00000345383 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
TTC8-202ENST00000345383 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
TTC8-202ENST00000345383 MAP3K1Q13233 1512 aa25.66■■□□□ 1.7
TTC8-202ENST00000345383 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
TTC8-202ENST00000345383 CENPBP07199 599 aaPredicted RBP25.64■■□□□ 1.7
TTC8-202ENST00000345383 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
TTC8-202ENST00000345383 CUL7Q14999 1698 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms