RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 NISCHQ9Y2I1 1504 aa36.19■■■■□ 3.38
TMEM39B-201ENST00000336294 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
TMEM39B-201ENST00000336294 ZCCHC6Q5VYS8 1495 aaKnown RBP30.53■■■□□ 2.48
TMEM39B-201ENST00000336294 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
TMEM39B-201ENST00000336294 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
TMEM39B-201ENST00000336294 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
TMEM39B-201ENST00000336294 MYO15BQ96JP2 1530 aa29.28■■■□□ 2.28
TMEM39B-201ENST00000336294 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
TMEM39B-201ENST00000336294 ABCC9O60706 1549 aa29.08■■■□□ 2.25
TMEM39B-201ENST00000336294 NACADO15069 1562 aa28.95■■■□□ 2.23
TMEM39B-201ENST00000336294 SCRIBQ14160 1630 aa28.89■■■□□ 2.22
TMEM39B-201ENST00000336294 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
TMEM39B-201ENST00000336294 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
TMEM39B-201ENST00000336294 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
TMEM39B-201ENST00000336294 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
TMEM39B-201ENST00000336294 UNC13AQ9UPW8 1703 aa28.02■■■□□ 2.08
TMEM39B-201ENST00000336294 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
TMEM39B-201ENST00000336294 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
TMEM39B-201ENST00000336294 WIZO95785 1651 aa27.82■■■□□ 2.04
TMEM39B-201ENST00000336294 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
TMEM39B-201ENST00000336294 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
TMEM39B-201ENST00000336294 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
TMEM39B-201ENST00000336294 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
TMEM39B-201ENST00000336294 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
TMEM39B-201ENST00000336294 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
TMEM39B-201ENST00000336294 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
TMEM39B-201ENST00000336294 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
TMEM39B-201ENST00000336294 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
TMEM39B-201ENST00000336294 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
TMEM39B-201ENST00000336294 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
TMEM39B-201ENST00000336294 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
TMEM39B-201ENST00000336294 FAM9AQ8IZU1 332 aaPredicted RBP26.98■■□□□ 1.91
TMEM39B-201ENST00000336294 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
TMEM39B-201ENST00000336294 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
TMEM39B-201ENST00000336294 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
TMEM39B-201ENST00000336294 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
TMEM39B-201ENST00000336294 WRNQ14191 1432 aaPredicted RBP eCLIP26.67■■□□□ 1.86
TMEM39B-201ENST00000336294 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
TMEM39B-201ENST00000336294 EEA1Q15075 1411 aa26.61■■□□□ 1.85
TMEM39B-201ENST00000336294 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
TMEM39B-201ENST00000336294 SOGA1O94964 1423 aa26.55■■□□□ 1.84
TMEM39B-201ENST00000336294 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
TMEM39B-201ENST00000336294 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
TMEM39B-201ENST00000336294 HRCP23327 699 aa26.46■■□□□ 1.83
TMEM39B-201ENST00000336294 CSRNP3Q8WYN3 585 aa26.42■■□□□ 1.82
TMEM39B-201ENST00000336294 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
TMEM39B-201ENST00000336294 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
TMEM39B-201ENST00000336294 TNIKQ9UKE5 1360 aa26.32■■□□□ 1.8
TMEM39B-201ENST00000336294 CFTRP13569 1480 aa26.32■■□□□ 1.8
TMEM39B-201ENST00000336294 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
TMEM39B-201ENST00000336294 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
TMEM39B-201ENST00000336294 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
TMEM39B-201ENST00000336294 CEP162Q5TB80 1403 aa26.25■■□□□ 1.79
TMEM39B-201ENST00000336294 KIF21BO75037 1637 aa26.23■■□□□ 1.79
TMEM39B-201ENST00000336294 CEP164Q9UPV0 1460 aa26.22■■□□□ 1.79
TMEM39B-201ENST00000336294 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
TMEM39B-201ENST00000336294 UBTFP17480 764 aaKnown RBP26.18■■□□□ 1.78
TMEM39B-201ENST00000336294 CUX1P39880 1505 aa26.15■■□□□ 1.78
TMEM39B-201ENST00000336294 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
TMEM39B-201ENST00000336294 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
TMEM39B-201ENST00000336294 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
TMEM39B-201ENST00000336294 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
TMEM39B-201ENST00000336294 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
TMEM39B-201ENST00000336294 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
TMEM39B-201ENST00000336294 CLIP1P30622 1438 aa25.9■■□□□ 1.74
TMEM39B-201ENST00000336294 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
TMEM39B-201ENST00000336294 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
TMEM39B-201ENST00000336294 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
TMEM39B-201ENST00000336294 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
TMEM39B-201ENST00000336294 CUX2O14529 1486 aa25.73■■□□□ 1.71
TMEM39B-201ENST00000336294 LAMC3Q9Y6N6 1575 aa25.72■■□□□ 1.71
TMEM39B-201ENST00000336294 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
TMEM39B-201ENST00000336294 NESP48681 1621 aa25.69■■□□□ 1.7
TMEM39B-201ENST00000336294 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
TMEM39B-201ENST00000336294 IGF1RP08069 1367 aa25.63■■□□□ 1.69
TMEM39B-201ENST00000336294 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
TMEM39B-201ENST00000336294 RANGAP1P46060 587 aaPredicted RBP25.59■■□□□ 1.69
TMEM39B-201ENST00000336294 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
TMEM39B-201ENST00000336294 APLP2Q06481 763 aa25.56■■□□□ 1.68
TMEM39B-201ENST00000336294 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
TMEM39B-201ENST00000336294 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
TMEM39B-201ENST00000336294 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
TMEM39B-201ENST00000336294 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
TMEM39B-201ENST00000336294 RAD54L2Q9Y4B4 1467 aa25.48■■□□□ 1.67
TMEM39B-201ENST00000336294 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
TMEM39B-201ENST00000336294 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
TMEM39B-201ENST00000336294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
TMEM39B-201ENST00000336294 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
TMEM39B-201ENST00000336294 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
TMEM39B-201ENST00000336294 CUL7Q14999 1698 aa25.38■■□□□ 1.65
TMEM39B-201ENST00000336294 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
TMEM39B-201ENST00000336294 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
TMEM39B-201ENST00000336294 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TMEM39B-201ENST00000336294 CTTNBP2Q8WZ74 1663 aa25.19■■□□□ 1.62
TMEM39B-201ENST00000336294 KANK4Q5T7N3 995 aaPredicted RBP25.19■■□□□ 1.62
TMEM39B-201ENST00000336294 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
TMEM39B-201ENST00000336294 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
TMEM39B-201ENST00000336294 TARBP1Q13395 1621 aaKnown RBP25.17■■□□□ 1.62
TMEM39B-201ENST00000336294 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
TMEM39B-201ENST00000336294 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms