RNA–Protein interactions for RNA: ENST00000544959.1

AP003785.1-201, humanhuman

TSL 4 BASIC

Gene AP003785.1, Length 492 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003785.1-201ENST00000544959 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
AP003785.1-201ENST00000544959 ABCC9O60706 1549 aa29.02■■■□□ 2.24
AP003785.1-201ENST00000544959 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
AP003785.1-201ENST00000544959 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
AP003785.1-201ENST00000544959 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
AP003785.1-201ENST00000544959 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
AP003785.1-201ENST00000544959 NACADO15069 1562 aa26.83■■□□□ 1.89
AP003785.1-201ENST00000544959 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
AP003785.1-201ENST00000544959 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
AP003785.1-201ENST00000544959 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
AP003785.1-201ENST00000544959 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
AP003785.1-201ENST00000544959 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
AP003785.1-201ENST00000544959 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.79
AP003785.1-201ENST00000544959 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
AP003785.1-201ENST00000544959 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
AP003785.1-201ENST00000544959 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
AP003785.1-201ENST00000544959 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
AP003785.1-201ENST00000544959 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
AP003785.1-201ENST00000544959 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
AP003785.1-201ENST00000544959 CUX2O14529 1486 aa25.29■■□□□ 1.64
AP003785.1-201ENST00000544959 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
AP003785.1-201ENST00000544959 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
AP003785.1-201ENST00000544959 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
AP003785.1-201ENST00000544959 NESP48681 1621 aa24.72■■□□□ 1.55
AP003785.1-201ENST00000544959 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
AP003785.1-201ENST00000544959 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.52
AP003785.1-201ENST00000544959 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
AP003785.1-201ENST00000544959 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
AP003785.1-201ENST00000544959 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
AP003785.1-201ENST00000544959 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
AP003785.1-201ENST00000544959 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
AP003785.1-201ENST00000544959 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
AP003785.1-201ENST00000544959 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
AP003785.1-201ENST00000544959 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
AP003785.1-201ENST00000544959 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
AP003785.1-201ENST00000544959 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
AP003785.1-201ENST00000544959 WDR62O43379 1518 aa24.06■■□□□ 1.44
AP003785.1-201ENST00000544959 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
AP003785.1-201ENST00000544959 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
AP003785.1-201ENST00000544959 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
AP003785.1-201ENST00000544959 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
AP003785.1-201ENST00000544959 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
AP003785.1-201ENST00000544959 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
AP003785.1-201ENST00000544959 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
AP003785.1-201ENST00000544959 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
AP003785.1-201ENST00000544959 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
AP003785.1-201ENST00000544959 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
AP003785.1-201ENST00000544959 WIZO95785 1651 aa23.6■■□□□ 1.37
AP003785.1-201ENST00000544959 CFTRP13569 1480 aa23.59■■□□□ 1.37
AP003785.1-201ENST00000544959 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
AP003785.1-201ENST00000544959 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
AP003785.1-201ENST00000544959 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
AP003785.1-201ENST00000544959 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
AP003785.1-201ENST00000544959 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
AP003785.1-201ENST00000544959 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
AP003785.1-201ENST00000544959 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
AP003785.1-201ENST00000544959 CHD1O14646 1710 aa23.22■■□□□ 1.31
AP003785.1-201ENST00000544959 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
AP003785.1-201ENST00000544959 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
AP003785.1-201ENST00000544959 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
AP003785.1-201ENST00000544959 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
AP003785.1-201ENST00000544959 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
AP003785.1-201ENST00000544959 FBLN2P98095 1184 aa23.15■■□□□ 1.3
AP003785.1-201ENST00000544959 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
AP003785.1-201ENST00000544959 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
AP003785.1-201ENST00000544959 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
AP003785.1-201ENST00000544959 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
AP003785.1-201ENST00000544959 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
AP003785.1-201ENST00000544959 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
AP003785.1-201ENST00000544959 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
AP003785.1-201ENST00000544959 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
AP003785.1-201ENST00000544959 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
AP003785.1-201ENST00000544959 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
AP003785.1-201ENST00000544959 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
AP003785.1-201ENST00000544959 SOGA1O94964 1423 aa22.82■■□□□ 1.24
AP003785.1-201ENST00000544959 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
AP003785.1-201ENST00000544959 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
AP003785.1-201ENST00000544959 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
AP003785.1-201ENST00000544959 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
AP003785.1-201ENST00000544959 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
AP003785.1-201ENST00000544959 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
AP003785.1-201ENST00000544959 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
AP003785.1-201ENST00000544959 ILDR1Q86SU0 546 aaPredicted RBP22.58■■□□□ 1.21
AP003785.1-201ENST00000544959 CUX1P39880 1505 aa22.53■■□□□ 1.2
AP003785.1-201ENST00000544959 KIF13AQ9H1H9 1805 aa22.49■■□□□ 1.19
AP003785.1-201ENST00000544959 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
AP003785.1-201ENST00000544959 KDM4FA0A1W2PPD8 638 aa22.45■■□□□ 1.18
AP003785.1-201ENST00000544959 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
AP003785.1-201ENST00000544959 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
AP003785.1-201ENST00000544959 NUP160Q12769 1436 aa22.38■■□□□ 1.17
AP003785.1-201ENST00000544959 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
AP003785.1-201ENST00000544959 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
AP003785.1-201ENST00000544959 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
AP003785.1-201ENST00000544959 FAM69CQ0P6D2 419 aa22.33■■□□□ 1.17
AP003785.1-201ENST00000544959 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
AP003785.1-201ENST00000544959 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
AP003785.1-201ENST00000544959 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
AP003785.1-201ENST00000544959 KDM6BO15054 1643 aa22.18■■□□□ 1.14
AP003785.1-201ENST00000544959 DIP2BQ9P265 1576 aa22.18■■□□□ 1.14
AP003785.1-201ENST00000544959 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms