RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 NISCHQ9Y2I1 1504 aa33.26■■■□□ 2.91
EFNB3-201ENST00000226091 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
EFNB3-201ENST00000226091 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
EFNB3-201ENST00000226091 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
EFNB3-201ENST00000226091 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
EFNB3-201ENST00000226091 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
EFNB3-201ENST00000226091 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
EFNB3-201ENST00000226091 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
EFNB3-201ENST00000226091 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
EFNB3-201ENST00000226091 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
EFNB3-201ENST00000226091 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.99
EFNB3-201ENST00000226091 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
EFNB3-201ENST00000226091 ABCC9O60706 1549 aa27.08■■□□□ 1.93
EFNB3-201ENST00000226091 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
EFNB3-201ENST00000226091 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
EFNB3-201ENST00000226091 HRCP23327 699 aa26.97■■□□□ 1.91
EFNB3-201ENST00000226091 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
EFNB3-201ENST00000226091 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
EFNB3-201ENST00000226091 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
EFNB3-201ENST00000226091 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.84
EFNB3-201ENST00000226091 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
EFNB3-201ENST00000226091 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
EFNB3-201ENST00000226091 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
EFNB3-201ENST00000226091 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
EFNB3-201ENST00000226091 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.77
EFNB3-201ENST00000226091 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
EFNB3-201ENST00000226091 WIZO95785 1651 aa25.98■■□□□ 1.75
EFNB3-201ENST00000226091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.89■■□□□ 1.73
EFNB3-201ENST00000226091 NACADO15069 1562 aa25.88■■□□□ 1.73
EFNB3-201ENST00000226091 UBTFP17480 764 aaKnown RBP25.84■■□□□ 1.73
EFNB3-201ENST00000226091 CCER1Q8TC90 406 aaPredicted RBP25.7■■□□□ 1.7
EFNB3-201ENST00000226091 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
EFNB3-201ENST00000226091 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
EFNB3-201ENST00000226091 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
EFNB3-201ENST00000226091 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
EFNB3-201ENST00000226091 SOGA1O94964 1423 aa25.52■■□□□ 1.68
EFNB3-201ENST00000226091 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
EFNB3-201ENST00000226091 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
EFNB3-201ENST00000226091 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
EFNB3-201ENST00000226091 HNRNPUL2Q1KMD3 747 aaKnown RBP25.4■■□□□ 1.66
EFNB3-201ENST00000226091 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
EFNB3-201ENST00000226091 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
EFNB3-201ENST00000226091 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
EFNB3-201ENST00000226091 CEP162Q5TB80 1403 aa25.21■■□□□ 1.63
EFNB3-201ENST00000226091 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.62
EFNB3-201ENST00000226091 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
EFNB3-201ENST00000226091 APLP2Q06481 763 aa25.14■■□□□ 1.62
EFNB3-201ENST00000226091 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
EFNB3-201ENST00000226091 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
EFNB3-201ENST00000226091 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
EFNB3-201ENST00000226091 ITGAEP38570 1179 aa25.01■■□□□ 1.59
EFNB3-201ENST00000226091 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
EFNB3-201ENST00000226091 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
EFNB3-201ENST00000226091 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.59
EFNB3-201ENST00000226091 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
EFNB3-201ENST00000226091 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
EFNB3-201ENST00000226091 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
EFNB3-201ENST00000226091 EEA1Q15075 1411 aa24.83■■□□□ 1.57
EFNB3-201ENST00000226091 GOLGA3Q08378 1498 aa24.81■■□□□ 1.56
EFNB3-201ENST00000226091 CLIP1P30622 1438 aa24.81■■□□□ 1.56
EFNB3-201ENST00000226091 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
EFNB3-201ENST00000226091 NEUROD1Q13562 356 aa24.76■■□□□ 1.55
EFNB3-201ENST00000226091 P3H3Q8IVL6 736 aa24.75■■□□□ 1.55
EFNB3-201ENST00000226091 RAPGEF2Q9Y4G8 1499 aa24.75■■□□□ 1.55
EFNB3-201ENST00000226091 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
EFNB3-201ENST00000226091 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
EFNB3-201ENST00000226091 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
EFNB3-201ENST00000226091 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
EFNB3-201ENST00000226091 GTF3C3Q9Y5Q9 886 aa24.59■■□□□ 1.53
EFNB3-201ENST00000226091 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.53
EFNB3-201ENST00000226091 MYT1Q01538 1121 aa24.58■■□□□ 1.53
EFNB3-201ENST00000226091 MIER1Q8N108 512 aa24.5■■□□□ 1.51
EFNB3-201ENST00000226091 KIF21BO75037 1637 aa24.5■■□□□ 1.51
EFNB3-201ENST00000226091 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
EFNB3-201ENST00000226091 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
EFNB3-201ENST00000226091 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
EFNB3-201ENST00000226091 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
EFNB3-201ENST00000226091 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
EFNB3-201ENST00000226091 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
EFNB3-201ENST00000226091 HIRIP3Q9BW71 556 aaPredicted RBP24.25■■□□□ 1.47
EFNB3-201ENST00000226091 CUX2O14529 1486 aa24.25■■□□□ 1.47
EFNB3-201ENST00000226091 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
EFNB3-201ENST00000226091 CUX1P39880 1505 aa24.24■■□□□ 1.47
EFNB3-201ENST00000226091 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
EFNB3-201ENST00000226091 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
EFNB3-201ENST00000226091 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
EFNB3-201ENST00000226091 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
EFNB3-201ENST00000226091 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
EFNB3-201ENST00000226091 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
EFNB3-201ENST00000226091 IGF1RP08069 1367 aa24.07■■□□□ 1.44
EFNB3-201ENST00000226091 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
EFNB3-201ENST00000226091 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
EFNB3-201ENST00000226091 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
EFNB3-201ENST00000226091 CFTRP13569 1480 aa24.03■■□□□ 1.44
EFNB3-201ENST00000226091 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
EFNB3-201ENST00000226091 NESP48681 1621 aa24.01■■□□□ 1.43
EFNB3-201ENST00000226091 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
EFNB3-201ENST00000226091 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
EFNB3-201ENST00000226091 KCNH8Q96L42 1107 aa23.98■■□□□ 1.43
EFNB3-201ENST00000226091 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms