RNA–Protein interactions for RNA: ENST00000296824.3

CCDC127-201, Transcript of coiled-coil domain containing 127, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC127, Length 9,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127-201ENST00000296824 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
CCDC127-201ENST00000296824 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
CCDC127-201ENST00000296824 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
CCDC127-201ENST00000296824 MYT1Q01538 1121 aa24.85■■□□□ 1.57
CCDC127-201ENST00000296824 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.55
CCDC127-201ENST00000296824 APLP2Q06481 763 aa24.53■■□□□ 1.52
CCDC127-201ENST00000296824 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
CCDC127-201ENST00000296824 YTHDC1Q96MU7 727 aaKnown RBP23.91■■□□□ 1.42
CCDC127-201ENST00000296824 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
CCDC127-201ENST00000296824 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
CCDC127-201ENST00000296824 NEFLP07196 543 aa23.67■■□□□ 1.38
CCDC127-201ENST00000296824 DAXXQ9UER7 740 aaPredicted RBP23.57■■□□□ 1.36
CCDC127-201ENST00000296824 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
CCDC127-201ENST00000296824 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
CCDC127-201ENST00000296824 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
CCDC127-201ENST00000296824 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
CCDC127-201ENST00000296824 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
CCDC127-201ENST00000296824 ATP1B4Q9UN42 357 aaPredicted RBP23.02■■□□□ 1.28
CCDC127-201ENST00000296824 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
CCDC127-201ENST00000296824 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
CCDC127-201ENST00000296824 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
CCDC127-201ENST00000296824 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
CCDC127-201ENST00000296824 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
CCDC127-201ENST00000296824 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
CCDC127-201ENST00000296824 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
CCDC127-201ENST00000296824 ZBTB47Q9UFB7 747 aaPredicted RBP22.48■■□□□ 1.19
CCDC127-201ENST00000296824 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
CCDC127-201ENST00000296824 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
CCDC127-201ENST00000296824 POLR3GLQ9BT43 218 aa22.3■■□□□ 1.16
CCDC127-201ENST00000296824 NEFMP07197 916 aa22.29■■□□□ 1.16
CCDC127-201ENST00000296824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
CCDC127-201ENST00000296824 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
CCDC127-201ENST00000296824 GLIPR1L2Q4G1C9 344 aa22.08■■□□□ 1.12
CCDC127-201ENST00000296824 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CCDC127-201ENST00000296824 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
CCDC127-201ENST00000296824 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
CCDC127-201ENST00000296824 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
CCDC127-201ENST00000296824 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
CCDC127-201ENST00000296824 CANXP27824 592 aaKnown RBP21.84■■□□□ 1.09
CCDC127-201ENST00000296824 ITGAEP38570 1179 aa21.73■■□□□ 1.07
CCDC127-201ENST00000296824 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
CCDC127-201ENST00000296824 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
CCDC127-201ENST00000296824 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
CCDC127-201ENST00000296824 BCANQ96GW7 911 aa21.58■■□□□ 1.05
CCDC127-201ENST00000296824 HRCP23327 699 aa21.55■■□□□ 1.04
CCDC127-201ENST00000296824 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
CCDC127-201ENST00000296824 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
CCDC127-201ENST00000296824 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
CCDC127-201ENST00000296824 ANP32CO43423 234 aa21.44■■□□□ 1.02
CCDC127-201ENST00000296824 TRIM52Q96A61 297 aa21.4■■□□□ 1.02
CCDC127-201ENST00000296824 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
CCDC127-201ENST00000296824 EIF5BO60841 1220 aaKnown RBP21.31■■□□□ 1
CCDC127-201ENST00000296824 BCL11AQ9H165 835 aa21.3■■□□□ 1
CCDC127-201ENST00000296824 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
CCDC127-201ENST00000296824 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
CCDC127-201ENST00000296824 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
CCDC127-201ENST00000296824 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
CCDC127-201ENST00000296824 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
CCDC127-201ENST00000296824 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
CCDC127-201ENST00000296824 STAG3Q9UJ98 1225 aa21.1■□□□□ 0.97
CCDC127-201ENST00000296824 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
CCDC127-201ENST00000296824 ZRSR1Q15695 479 aaKnown RBP21.05■□□□□ 0.96
CCDC127-201ENST00000296824 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
CCDC127-201ENST00000296824 NEUROD1Q13562 356 aa21■□□□□ 0.95
CCDC127-201ENST00000296824 NCLP19338 710 aaKnown RBP20.98■□□□□ 0.95
CCDC127-201ENST00000296824 GTF3C3Q9Y5Q9 886 aa20.98■□□□□ 0.95
CCDC127-201ENST00000296824 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
CCDC127-201ENST00000296824 GOLGA6L22H0YM25 854 aa20.88■□□□□ 0.93
CCDC127-201ENST00000296824 FBLN2P98095 1184 aa20.87■□□□□ 0.93
CCDC127-201ENST00000296824 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
CCDC127-201ENST00000296824 CASC1Q6TDU7 716 aa20.81■□□□□ 0.92
CCDC127-201ENST00000296824 L1TD1Q5T7N2 865 aaKnown RBP20.81■□□□□ 0.92
CCDC127-201ENST00000296824 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCDC127-201ENST00000296824 NRDCO43847 1150 aa20.79■□□□□ 0.92
CCDC127-201ENST00000296824 BECN1Q14457 450 aa20.79■□□□□ 0.92
CCDC127-201ENST00000296824 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
CCDC127-201ENST00000296824 A0A0G2JS52 829 aa20.75■□□□□ 0.91
CCDC127-201ENST00000296824 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCDC127-201ENST00000296824 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
CCDC127-201ENST00000296824 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.89
CCDC127-201ENST00000296824 DDRGK1Q96HY6 314 aa20.63■□□□□ 0.89
CCDC127-201ENST00000296824 NPHP1O15259 732 aa20.61■□□□□ 0.89
CCDC127-201ENST00000296824 PTMAP06454 111 aaKnown RBP20.6■□□□□ 0.89
CCDC127-201ENST00000296824 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.88
CCDC127-201ENST00000296824 HAP1P54257 671 aaPredicted RBP20.57■□□□□ 0.88
CCDC127-201ENST00000296824 DNTTIP2Q5QJE6 756 aaKnown RBP20.54■□□□□ 0.88
CCDC127-201ENST00000296824 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
CCDC127-201ENST00000296824 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
CCDC127-201ENST00000296824 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
CCDC127-201ENST00000296824 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.88
CCDC127-201ENST00000296824 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
CCDC127-201ENST00000296824 C14orf37Q86TY3 774 aa20.52■□□□□ 0.88
CCDC127-201ENST00000296824 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
CCDC127-201ENST00000296824 TULP1O00294 542 aaPredicted RBP20.5■□□□□ 0.87
CCDC127-201ENST00000296824 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
CCDC127-201ENST00000296824 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
CCDC127-201ENST00000296824 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
CCDC127-201ENST00000296824 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
CCDC127-201ENST00000296824 CLSTN1O94985 981 aa20.46■□□□□ 0.87
CCDC127-201ENST00000296824 USP35Q9P2H5 1018 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms