RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 NISCHQ9Y2I1 1504 aa31.81■■■□□ 2.68
PDLIM5-203ENST00000359265 ABCC9O60706 1549 aa28.86■■■□□ 2.21
PDLIM5-203ENST00000359265 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
PDLIM5-203ENST00000359265 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
PDLIM5-203ENST00000359265 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
PDLIM5-203ENST00000359265 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
PDLIM5-203ENST00000359265 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
PDLIM5-203ENST00000359265 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
PDLIM5-203ENST00000359265 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
PDLIM5-203ENST00000359265 NACADO15069 1562 aa26.42■■□□□ 1.82
PDLIM5-203ENST00000359265 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.81
PDLIM5-203ENST00000359265 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
PDLIM5-203ENST00000359265 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
PDLIM5-203ENST00000359265 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
PDLIM5-203ENST00000359265 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
PDLIM5-203ENST00000359265 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
PDLIM5-203ENST00000359265 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
PDLIM5-203ENST00000359265 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
PDLIM5-203ENST00000359265 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
PDLIM5-203ENST00000359265 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
PDLIM5-203ENST00000359265 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
PDLIM5-203ENST00000359265 CUX2O14529 1486 aa25.21■■□□□ 1.63
PDLIM5-203ENST00000359265 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
PDLIM5-203ENST00000359265 ERCC6Q03468 1493 aa24.89■■□□□ 1.57
PDLIM5-203ENST00000359265 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
PDLIM5-203ENST00000359265 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
PDLIM5-203ENST00000359265 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
PDLIM5-203ENST00000359265 NESP48681 1621 aa24.53■■□□□ 1.52
PDLIM5-203ENST00000359265 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
PDLIM5-203ENST00000359265 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
PDLIM5-203ENST00000359265 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
PDLIM5-203ENST00000359265 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
PDLIM5-203ENST00000359265 WIZO95785 1651 aa24.36■■□□□ 1.49
PDLIM5-203ENST00000359265 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
PDLIM5-203ENST00000359265 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
PDLIM5-203ENST00000359265 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
PDLIM5-203ENST00000359265 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
PDLIM5-203ENST00000359265 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
PDLIM5-203ENST00000359265 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
PDLIM5-203ENST00000359265 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
PDLIM5-203ENST00000359265 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
PDLIM5-203ENST00000359265 OSCARQ8IYS5 282 aa23.96■■□□□ 1.43
PDLIM5-203ENST00000359265 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PDLIM5-203ENST00000359265 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
PDLIM5-203ENST00000359265 WDR62O43379 1518 aa23.79■■□□□ 1.4
PDLIM5-203ENST00000359265 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
PDLIM5-203ENST00000359265 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
PDLIM5-203ENST00000359265 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
PDLIM5-203ENST00000359265 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
PDLIM5-203ENST00000359265 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
PDLIM5-203ENST00000359265 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
PDLIM5-203ENST00000359265 ARHGEF11O15085 1522 aa23.56■■□□□ 1.36
PDLIM5-203ENST00000359265 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
PDLIM5-203ENST00000359265 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
PDLIM5-203ENST00000359265 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
PDLIM5-203ENST00000359265 CFTRP13569 1480 aa23.45■■□□□ 1.34
PDLIM5-203ENST00000359265 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
PDLIM5-203ENST00000359265 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
PDLIM5-203ENST00000359265 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
PDLIM5-203ENST00000359265 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
PDLIM5-203ENST00000359265 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
PDLIM5-203ENST00000359265 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
PDLIM5-203ENST00000359265 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
PDLIM5-203ENST00000359265 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
PDLIM5-203ENST00000359265 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
PDLIM5-203ENST00000359265 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
PDLIM5-203ENST00000359265 CHD1O14646 1710 aa23.03■■□□□ 1.28
PDLIM5-203ENST00000359265 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
PDLIM5-203ENST00000359265 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
PDLIM5-203ENST00000359265 CUX1P39880 1505 aa22.97■■□□□ 1.27
PDLIM5-203ENST00000359265 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PDLIM5-203ENST00000359265 EIF4G3O43432 1585 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-203ENST00000359265 FBLN2P98095 1184 aa22.93■■□□□ 1.26
PDLIM5-203ENST00000359265 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
PDLIM5-203ENST00000359265 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
PDLIM5-203ENST00000359265 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDLIM5-203ENST00000359265 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
PDLIM5-203ENST00000359265 EEA1Q15075 1411 aa22.77■■□□□ 1.24
PDLIM5-203ENST00000359265 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
PDLIM5-203ENST00000359265 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
PDLIM5-203ENST00000359265 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
PDLIM5-203ENST00000359265 SOGA1O94964 1423 aa22.71■■□□□ 1.23
PDLIM5-203ENST00000359265 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
PDLIM5-203ENST00000359265 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
PDLIM5-203ENST00000359265 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
PDLIM5-203ENST00000359265 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
PDLIM5-203ENST00000359265 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
PDLIM5-203ENST00000359265 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
PDLIM5-203ENST00000359265 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
PDLIM5-203ENST00000359265 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
PDLIM5-203ENST00000359265 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
PDLIM5-203ENST00000359265 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
PDLIM5-203ENST00000359265 KIF21BO75037 1637 aa22.53■■□□□ 1.2
PDLIM5-203ENST00000359265 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
PDLIM5-203ENST00000359265 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
PDLIM5-203ENST00000359265 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
PDLIM5-203ENST00000359265 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
PDLIM5-203ENST00000359265 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
PDLIM5-203ENST00000359265 PBRM1Q86U86 1689 aa22.41■■□□□ 1.18
PDLIM5-203ENST00000359265 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms