RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 NISCHQ9Y2I1 1504 aa37.03■■■■□ 3.52
CDK11A-208ENST00000404249 CCDC180Q9P1Z9 1646 aa31.61■■■□□ 2.65
CDK11A-208ENST00000404249 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
CDK11A-208ENST00000404249 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
CDK11A-208ENST00000404249 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
CDK11A-208ENST00000404249 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
CDK11A-208ENST00000404249 DCAF8L2P0C7V8 631 aa30.43■■■□□ 2.46
CDK11A-208ENST00000404249 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
CDK11A-208ENST00000404249 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
CDK11A-208ENST00000404249 ABCC9O60706 1549 aa29.65■■■□□ 2.34
CDK11A-208ENST00000404249 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
CDK11A-208ENST00000404249 RSF1Q96T23 1441 aaPredicted RBP29.26■■■□□ 2.27
CDK11A-208ENST00000404249 HRCP23327 699 aa29.16■■■□□ 2.26
CDK11A-208ENST00000404249 NACADO15069 1562 aa29.13■■■□□ 2.25
CDK11A-208ENST00000404249 PCGF6Q9BYE7 350 aa29.06■■■□□ 2.24
CDK11A-208ENST00000404249 LOC105371045A0A1W2PR82 267 aa29.05■■■□□ 2.24
CDK11A-208ENST00000404249 RB1CC1Q8TDY2 1594 aa29.03■■■□□ 2.24
CDK11A-208ENST00000404249 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
CDK11A-208ENST00000404249 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
CDK11A-208ENST00000404249 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
CDK11A-208ENST00000404249 WIZO95785 1651 aa28.64■■■□□ 2.18
CDK11A-208ENST00000404249 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
CDK11A-208ENST00000404249 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
CDK11A-208ENST00000404249 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
CDK11A-208ENST00000404249 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
CDK11A-208ENST00000404249 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
CDK11A-208ENST00000404249 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
CDK11A-208ENST00000404249 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
CDK11A-208ENST00000404249 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
CDK11A-208ENST00000404249 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
CDK11A-208ENST00000404249 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
CDK11A-208ENST00000404249 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
CDK11A-208ENST00000404249 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
CDK11A-208ENST00000404249 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
CDK11A-208ENST00000404249 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
CDK11A-208ENST00000404249 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
CDK11A-208ENST00000404249 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDK11A-208ENST00000404249 SOGA1O94964 1423 aa27.67■■■□□ 2.02
CDK11A-208ENST00000404249 EEA1Q15075 1411 aa27.64■■■□□ 2.02
CDK11A-208ENST00000404249 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
CDK11A-208ENST00000404249 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
CDK11A-208ENST00000404249 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
CDK11A-208ENST00000404249 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
CDK11A-208ENST00000404249 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
CDK11A-208ENST00000404249 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
CDK11A-208ENST00000404249 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
CDK11A-208ENST00000404249 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
CDK11A-208ENST00000404249 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
CDK11A-208ENST00000404249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
CDK11A-208ENST00000404249 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
CDK11A-208ENST00000404249 CCER1Q8TC90 406 aaPredicted RBP27.32■■□□□ 1.96
CDK11A-208ENST00000404249 KIF21BO75037 1637 aa27.31■■□□□ 1.96
CDK11A-208ENST00000404249 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
CDK11A-208ENST00000404249 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.96
CDK11A-208ENST00000404249 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
CDK11A-208ENST00000404249 CLIP1P30622 1438 aa27.08■■□□□ 1.93
CDK11A-208ENST00000404249 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
CDK11A-208ENST00000404249 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
CDK11A-208ENST00000404249 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
CDK11A-208ENST00000404249 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
CDK11A-208ENST00000404249 NCAPD3P42695 1498 aa26.9■■□□□ 1.9
CDK11A-208ENST00000404249 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
CDK11A-208ENST00000404249 SCAF1Q9H7N4 1312 aaKnown RBP26.84■■□□□ 1.89
CDK11A-208ENST00000404249 DIEXFQ68CQ4 756 aaKnown RBP26.81■■□□□ 1.88
CDK11A-208ENST00000404249 CUX1P39880 1505 aa26.79■■□□□ 1.88
CDK11A-208ENST00000404249 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
CDK11A-208ENST00000404249 APLP2Q06481 763 aa26.77■■□□□ 1.88
CDK11A-208ENST00000404249 HNRNPUL2Q1KMD3 747 aaKnown RBP26.74■■□□□ 1.87
CDK11A-208ENST00000404249 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
CDK11A-208ENST00000404249 CFTRP13569 1480 aa26.7■■□□□ 1.86
CDK11A-208ENST00000404249 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
CDK11A-208ENST00000404249 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
CDK11A-208ENST00000404249 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
CDK11A-208ENST00000404249 ZNF316A6NFI3 1004 aaPredicted RBP26.64■■□□□ 1.85
CDK11A-208ENST00000404249 ACIN1Q9UKV3 1341 aaKnown RBP26.62■■□□□ 1.85
CDK11A-208ENST00000404249 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
CDK11A-208ENST00000404249 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
CDK11A-208ENST00000404249 ARHGAP35Q9NRY4 1499 aa26.42■■□□□ 1.82
CDK11A-208ENST00000404249 KANK4Q5T7N3 995 aaPredicted RBP26.41■■□□□ 1.82
CDK11A-208ENST00000404249 CUX2O14529 1486 aa26.38■■□□□ 1.81
CDK11A-208ENST00000404249 RRBP1Q9P2E9 1410 aaKnown RBP26.38■■□□□ 1.81
CDK11A-208ENST00000404249 PELP1Q8IZL8 1130 aaKnown RBP26.37■■□□□ 1.81
CDK11A-208ENST00000404249 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
CDK11A-208ENST00000404249 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.81
CDK11A-208ENST00000404249 DHX57Q6P158 1386 aaKnown RBP26.33■■□□□ 1.81
CDK11A-208ENST00000404249 IGF1RP08069 1367 aa26.31■■□□□ 1.8
CDK11A-208ENST00000404249 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
CDK11A-208ENST00000404249 GTF3C3Q9Y5Q9 886 aa26.28■■□□□ 1.8
CDK11A-208ENST00000404249 CCNB3Q8WWL7 1395 aa26.22■■□□□ 1.79
CDK11A-208ENST00000404249 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CDK11A-208ENST00000404249 MIER1Q8N108 512 aa26.22■■□□□ 1.79
CDK11A-208ENST00000404249 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
CDK11A-208ENST00000404249 TIAM1Q13009 1591 aa26.2■■□□□ 1.78
CDK11A-208ENST00000404249 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
CDK11A-208ENST00000404249 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
CDK11A-208ENST00000404249 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
CDK11A-208ENST00000404249 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
CDK11A-208ENST00000404249 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
CDK11A-208ENST00000404249 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
CDK11A-208ENST00000404249 PCF11O94913 1555 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms