RNA–Protein interactions for RNA: ENST00000430198.2

HMGA1P2-201, Transcript of high mobility group AT-hook 1 pseudogene 2, humanhuman

BASIC

Gene HMGA1P2, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P2-201ENST00000430198 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
HMGA1P2-201ENST00000430198 ABCC9O60706 1549 aa28.84■■■□□ 2.21
HMGA1P2-201ENST00000430198 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
HMGA1P2-201ENST00000430198 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
HMGA1P2-201ENST00000430198 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
HMGA1P2-201ENST00000430198 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
HMGA1P2-201ENST00000430198 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
HMGA1P2-201ENST00000430198 NACADO15069 1562 aa26.77■■□□□ 1.88
HMGA1P2-201ENST00000430198 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
HMGA1P2-201ENST00000430198 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
HMGA1P2-201ENST00000430198 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.79
HMGA1P2-201ENST00000430198 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
HMGA1P2-201ENST00000430198 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
HMGA1P2-201ENST00000430198 ZCCHC6Q5VYS8 1495 aaKnown RBP25.86■■□□□ 1.73
HMGA1P2-201ENST00000430198 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
HMGA1P2-201ENST00000430198 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
HMGA1P2-201ENST00000430198 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
HMGA1P2-201ENST00000430198 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
HMGA1P2-201ENST00000430198 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
HMGA1P2-201ENST00000430198 CUX2O14529 1486 aa24.82■■□□□ 1.56
HMGA1P2-201ENST00000430198 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
HMGA1P2-201ENST00000430198 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
HMGA1P2-201ENST00000430198 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
HMGA1P2-201ENST00000430198 NESP48681 1621 aa24.71■■□□□ 1.55
HMGA1P2-201ENST00000430198 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
HMGA1P2-201ENST00000430198 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
HMGA1P2-201ENST00000430198 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
HMGA1P2-201ENST00000430198 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
HMGA1P2-201ENST00000430198 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
HMGA1P2-201ENST00000430198 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
HMGA1P2-201ENST00000430198 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
HMGA1P2-201ENST00000430198 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
HMGA1P2-201ENST00000430198 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
HMGA1P2-201ENST00000430198 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
HMGA1P2-201ENST00000430198 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
HMGA1P2-201ENST00000430198 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
HMGA1P2-201ENST00000430198 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
HMGA1P2-201ENST00000430198 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
HMGA1P2-201ENST00000430198 WIZO95785 1651 aa23.93■■□□□ 1.42
HMGA1P2-201ENST00000430198 WDR62O43379 1518 aa23.91■■□□□ 1.42
HMGA1P2-201ENST00000430198 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
HMGA1P2-201ENST00000430198 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
HMGA1P2-201ENST00000430198 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
HMGA1P2-201ENST00000430198 CFTRP13569 1480 aa23.68■■□□□ 1.38
HMGA1P2-201ENST00000430198 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
HMGA1P2-201ENST00000430198 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
HMGA1P2-201ENST00000430198 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
HMGA1P2-201ENST00000430198 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
HMGA1P2-201ENST00000430198 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
HMGA1P2-201ENST00000430198 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
HMGA1P2-201ENST00000430198 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
HMGA1P2-201ENST00000430198 CYB5RLQ6IPT4 315 aa23.36■■□□□ 1.33
HMGA1P2-201ENST00000430198 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
HMGA1P2-201ENST00000430198 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
HMGA1P2-201ENST00000430198 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
HMGA1P2-201ENST00000430198 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
HMGA1P2-201ENST00000430198 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.31
HMGA1P2-201ENST00000430198 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
HMGA1P2-201ENST00000430198 FBLN2P98095 1184 aa23.18■■□□□ 1.3
HMGA1P2-201ENST00000430198 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
HMGA1P2-201ENST00000430198 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
HMGA1P2-201ENST00000430198 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
HMGA1P2-201ENST00000430198 CHD1O14646 1710 aa23.12■■□□□ 1.29
HMGA1P2-201ENST00000430198 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
HMGA1P2-201ENST00000430198 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
HMGA1P2-201ENST00000430198 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
HMGA1P2-201ENST00000430198 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
HMGA1P2-201ENST00000430198 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
HMGA1P2-201ENST00000430198 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
HMGA1P2-201ENST00000430198 SOGA1O94964 1423 aa22.95■■□□□ 1.26
HMGA1P2-201ENST00000430198 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
HMGA1P2-201ENST00000430198 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
HMGA1P2-201ENST00000430198 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
HMGA1P2-201ENST00000430198 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
HMGA1P2-201ENST00000430198 CUX1P39880 1505 aa22.77■■□□□ 1.24
HMGA1P2-201ENST00000430198 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
HMGA1P2-201ENST00000430198 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
HMGA1P2-201ENST00000430198 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
HMGA1P2-201ENST00000430198 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
HMGA1P2-201ENST00000430198 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
HMGA1P2-201ENST00000430198 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
HMGA1P2-201ENST00000430198 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
HMGA1P2-201ENST00000430198 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
HMGA1P2-201ENST00000430198 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
HMGA1P2-201ENST00000430198 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
HMGA1P2-201ENST00000430198 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
HMGA1P2-201ENST00000430198 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
HMGA1P2-201ENST00000430198 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
HMGA1P2-201ENST00000430198 NUP160Q12769 1436 aa22.39■■□□□ 1.17
HMGA1P2-201ENST00000430198 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
HMGA1P2-201ENST00000430198 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
HMGA1P2-201ENST00000430198 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
HMGA1P2-201ENST00000430198 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
HMGA1P2-201ENST00000430198 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
HMGA1P2-201ENST00000430198 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
HMGA1P2-201ENST00000430198 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
HMGA1P2-201ENST00000430198 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
HMGA1P2-201ENST00000430198 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
HMGA1P2-201ENST00000430198 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
HMGA1P2-201ENST00000430198 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms