RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
CNTNAP2-225ENST00000639247 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
CNTNAP2-225ENST00000639247 ABCC9O60706 1549 aa29.05■■■□□ 2.24
CNTNAP2-225ENST00000639247 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
CNTNAP2-225ENST00000639247 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
CNTNAP2-225ENST00000639247 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
CNTNAP2-225ENST00000639247 NACADO15069 1562 aa28.05■■■□□ 2.08
CNTNAP2-225ENST00000639247 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
CNTNAP2-225ENST00000639247 RB1CC1Q8TDY2 1594 aa27.97■■■□□ 2.07
CNTNAP2-225ENST00000639247 SHROOM4Q9ULL8 1493 aa27.66■■■□□ 2.02
CNTNAP2-225ENST00000639247 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
CNTNAP2-225ENST00000639247 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
CNTNAP2-225ENST00000639247 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
CNTNAP2-225ENST00000639247 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
CNTNAP2-225ENST00000639247 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.86
CNTNAP2-225ENST00000639247 EIF4G1Q04637 1599 aaKnown RBP26.44■■□□□ 1.82
CNTNAP2-225ENST00000639247 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
CNTNAP2-225ENST00000639247 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
CNTNAP2-225ENST00000639247 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP2-225ENST00000639247 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
CNTNAP2-225ENST00000639247 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
CNTNAP2-225ENST00000639247 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
CNTNAP2-225ENST00000639247 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CNTNAP2-225ENST00000639247 WIZO95785 1651 aa26.2■■□□□ 1.79
CNTNAP2-225ENST00000639247 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
CNTNAP2-225ENST00000639247 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
CNTNAP2-225ENST00000639247 SMARCA2P51531 1590 aa26■■□□□ 1.75
CNTNAP2-225ENST00000639247 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
CNTNAP2-225ENST00000639247 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
CNTNAP2-225ENST00000639247 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
CNTNAP2-225ENST00000639247 TOP2AP11388 1531 aaKnown RBP25.81■■□□□ 1.72
CNTNAP2-225ENST00000639247 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
CNTNAP2-225ENST00000639247 NESP48681 1621 aa25.35■■□□□ 1.65
CNTNAP2-225ENST00000639247 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
CNTNAP2-225ENST00000639247 CFTRP13569 1480 aa25.22■■□□□ 1.63
CNTNAP2-225ENST00000639247 LAMC3Q9Y6N6 1575 aa25.12■■□□□ 1.61
CNTNAP2-225ENST00000639247 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
CNTNAP2-225ENST00000639247 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
CNTNAP2-225ENST00000639247 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
CNTNAP2-225ENST00000639247 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.59
CNTNAP2-225ENST00000639247 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
CNTNAP2-225ENST00000639247 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
CNTNAP2-225ENST00000639247 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
CNTNAP2-225ENST00000639247 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
CNTNAP2-225ENST00000639247 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
CNTNAP2-225ENST00000639247 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
CNTNAP2-225ENST00000639247 CUX1P39880 1505 aa24.74■■□□□ 1.55
CNTNAP2-225ENST00000639247 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
CNTNAP2-225ENST00000639247 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
CNTNAP2-225ENST00000639247 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
CNTNAP2-225ENST00000639247 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
CNTNAP2-225ENST00000639247 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
CNTNAP2-225ENST00000639247 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
CNTNAP2-225ENST00000639247 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
CNTNAP2-225ENST00000639247 WDR62O43379 1518 aa24.58■■□□□ 1.53
CNTNAP2-225ENST00000639247 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
CNTNAP2-225ENST00000639247 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
CNTNAP2-225ENST00000639247 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
CNTNAP2-225ENST00000639247 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
CNTNAP2-225ENST00000639247 CUX2O14529 1486 aa24.45■■□□□ 1.51
CNTNAP2-225ENST00000639247 SOGA1O94964 1423 aa24.42■■□□□ 1.5
CNTNAP2-225ENST00000639247 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
CNTNAP2-225ENST00000639247 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
CNTNAP2-225ENST00000639247 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.48
CNTNAP2-225ENST00000639247 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
CNTNAP2-225ENST00000639247 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CNTNAP2-225ENST00000639247 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
CNTNAP2-225ENST00000639247 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
CNTNAP2-225ENST00000639247 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
CNTNAP2-225ENST00000639247 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.47
CNTNAP2-225ENST00000639247 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
CNTNAP2-225ENST00000639247 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
CNTNAP2-225ENST00000639247 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
CNTNAP2-225ENST00000639247 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
CNTNAP2-225ENST00000639247 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
CNTNAP2-225ENST00000639247 IGF1RP08069 1367 aa24.06■■□□□ 1.44
CNTNAP2-225ENST00000639247 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
CNTNAP2-225ENST00000639247 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
CNTNAP2-225ENST00000639247 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
CNTNAP2-225ENST00000639247 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
CNTNAP2-225ENST00000639247 EEA1Q15075 1411 aa23.96■■□□□ 1.43
CNTNAP2-225ENST00000639247 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
CNTNAP2-225ENST00000639247 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
CNTNAP2-225ENST00000639247 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
CNTNAP2-225ENST00000639247 FBLN2P98095 1184 aa23.89■■□□□ 1.41
CNTNAP2-225ENST00000639247 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
CNTNAP2-225ENST00000639247 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
CNTNAP2-225ENST00000639247 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
CNTNAP2-225ENST00000639247 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.4
CNTNAP2-225ENST00000639247 CUL7Q14999 1698 aa23.82■■□□□ 1.4
CNTNAP2-225ENST00000639247 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
CNTNAP2-225ENST00000639247 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
CNTNAP2-225ENST00000639247 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
CNTNAP2-225ENST00000639247 KIF21BO75037 1637 aa23.76■■□□□ 1.39
CNTNAP2-225ENST00000639247 CHD1O14646 1710 aa23.75■■□□□ 1.39
CNTNAP2-225ENST00000639247 UBTFP17480 764 aaKnown RBP23.72■■□□□ 1.39
CNTNAP2-225ENST00000639247 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
CNTNAP2-225ENST00000639247 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
CNTNAP2-225ENST00000639247 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
CNTNAP2-225ENST00000639247 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms