Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 B3GNTL1-206ENST00000571954 881 ntTSL 512.57□□□□□ -0.44e-7■■■■■ 28.8
DDX59Q5T1V6 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.484e-7■■■■■ 28.8
DDX59Q5T1V6 B3GNTL1-202ENST00000570947 390 ntTSL 39.95□□□□□ -0.824e-7■■■■■ 28.8
DDX59Q5T1V6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.37■■□□□ 1.659e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.89e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.459e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.31■□□□□ 0.049e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)14.64□□□□□ -0.079e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.83□□□□□ -0.29e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)12.84□□□□□ -0.359e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)12.75□□□□□ -0.379e-8■■■■■ 28.7
DDX59Q5T1V6 SLC22A23-211ENST00000496753 561 ntTSL 410.59□□□□□ -0.719e-8■■■■■ 28.7
DDX59Q5T1V6 CNOT3-209ENST00000617930 2047 ntTSL 216.7■□□□□ 0.267e-7■■■■■ 28.7
DDX59Q5T1V6 CNOT3-208ENST00000613073 2778 ntTSL 216.06■□□□□ 0.167e-7■■■■■ 28.7
DDX59Q5T1V6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.02■□□□□ 0.157e-7■■■■■ 28.7
DDX59Q5T1V6 CNOT3-207ENST00000496327 784 ntTSL 515.19■□□□□ 0.027e-7■■■■■ 28.7
DDX59Q5T1V6 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.577e-7■■■■■ 28.7
DDX59Q5T1V6 CNOT3-205ENST00000457463 1269 ntTSL 311.12□□□□□ -0.637e-7■■■■■ 28.7
DDX59Q5T1V6 DENND5B-206ENST00000545147 566 ntTSL 220.37■□□□□ 0.854e-6■■■■■ 28.7
DDX59Q5T1V6 DENND5B-205ENST00000544698 643 ntTSL 319.48■□□□□ 0.714e-6■■■■■ 28.7
DDX59Q5T1V6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.16■□□□□ 0.344e-6■■■■■ 28.7
DDX59Q5T1V6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.034e-6■■■■■ 28.7
DDX59Q5T1V6 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC9.72□□□□□ -0.854e-6■■■■■ 28.7
DDX59Q5T1V6 SUMO3-205ENST00000466861 753 ntTSL 221.14■□□□□ 0.973e-6■■■■■ 28.6
DDX59Q5T1V6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.28■□□□□ 0.683e-6■■■■■ 28.6
DDX59Q5T1V6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.633e-6■■■■■ 28.6
DDX59Q5T1V6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.1□□□□□ -0.153e-6■■■■■ 28.6
DDX59Q5T1V6 SUMO3-206ENST00000479153 1736 ntTSL 212.14□□□□□ -0.473e-6■■■■■ 28.6
DDX59Q5T1V6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.34□□□□□ -1.393e-6■■■■■ 28.6
DDX59Q5T1V6 BCL3-207ENST00000474300 819 ntTSL 215.26■□□□□ 0.034e-6■■■■■ 28.5
DDX59Q5T1V6 BCL3-206ENST00000473473 445 ntTSL 26.55□□□□□ -1.364e-6■■■■■ 28.5
DDX59Q5T1V6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.042e-7■■■■■ 28.5
DDX59Q5T1V6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.184e-6■■■■■ 28.5
DDX59Q5T1V6 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.284e-6■■■■■ 28.5
DDX59Q5T1V6 ADGRG3-205ENST00000567991 2317 ntTSL 1 (best)12.32□□□□□ -0.444e-6■■■■■ 28.5
DDX59Q5T1V6 ADGRG3-207ENST00000569977 1215 ntTSL 1 (best)12.2□□□□□ -0.464e-6■■■■■ 28.5
DDX59Q5T1V6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.767e-8■■■■■ 28.5
DDX59Q5T1V6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.311e-6■■■■■ 28.4
DDX59Q5T1V6 CDC34-203ENST00000586788 900 ntTSL 221.74■■□□□ 1.075e-7■■■■■ 28.4
DDX59Q5T1V6 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.57□□□□□ -0.885e-7■■■■■ 28.4
DDX59Q5T1V6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.485e-7■■■■■ 28.4
DDX59Q5T1V6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.66■□□□□ 0.584e-7■■■■■ 28.3
DDX59Q5T1V6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.444e-7■■■■■ 28.3
DDX59Q5T1V6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.384e-7■■■■■ 28.3
DDX59Q5T1V6 TMC6-224ENST00000593044 3070 ntTSL 215.35■□□□□ 0.054e-7■■■■■ 28.3
DDX59Q5T1V6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.044e-7■■■■■ 28.3
DDX59Q5T1V6 MLXIPL-207ENST00000453275 690 ntTSL 517.7■□□□□ 0.424e-19■■■■■ 28.3
DDX59Q5T1V6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.741e-6■■■■■ 28.3
DDX59Q5T1V6 TAF4-203ENST00000474089 532 ntTSL 217.49■□□□□ 0.391e-6■■■■■ 28.3
DDX59Q5T1V6 TAF4-202ENST00000436129 2440 ntTSL 214.81□□□□□ -0.041e-6■■■■■ 28.3
DDX59Q5T1V6 SBNO2-205ENST00000587655 914 ntTSL 313.7□□□□□ -0.222e-6■■■■■ 28.2
DDX59Q5T1V6 COPG2-202ENST00000425248 3134 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.755e-6■■■■■ 28.2
DDX59Q5T1V6 COPG2-203ENST00000617523 2142 ntTSL 57.97□□□□□ -1.135e-6■■■■■ 28.2
DDX59Q5T1V6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.981e-6■■■■■ 28.2
DDX59Q5T1V6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.271e-6■■■■■ 28.2
DDX59Q5T1V6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.141e-6■■■■■ 28.2
DDX59Q5T1V6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -01e-6■■■■■ 28.2
DDX59Q5T1V6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.33■□□□□ 0.22e-8■■■■■ 28.2
DDX59Q5T1V6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.45■□□□□ 0.062e-8■■■■■ 28.2
DDX59Q5T1V6 TLK1-201ENST00000359766 4321 ntTSL 510.17□□□□□ -0.783e-9■■■■■ 28.2
DDX59Q5T1V6 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC10.52□□□□□ -0.736e-7■■■■■ 28.1
DDX59Q5T1V6 HMG20B-209ENST00000470356 806 ntTSL 1 (best)28■■■□□ 2.071e-7■■■■■ 28
DDX59Q5T1V6 HMG20B-201ENST00000262949 886 ntTSL 520.56■□□□□ 0.881e-7■■■■■ 28
DDX59Q5T1V6 HMG20B-205ENST00000435022 616 ntTSL 519.95■□□□□ 0.781e-7■■■■■ 28
DDX59Q5T1V6 HMG20B-203ENST00000416526 711 ntTSL 319.77■□□□□ 0.761e-7■■■■■ 28
DDX59Q5T1V6 HMG20B-206ENST00000453933 759 ntTSL 219.15■□□□□ 0.661e-7■■■■■ 28
DDX59Q5T1V6 HMG20B-204ENST00000417382 561 ntTSL 419.08■□□□□ 0.641e-7■■■■■ 28
DDX59Q5T1V6 SYVN1-209ENST00000527765 516 ntTSL 311.56□□□□□ -0.562e-10■■■■■ 28
DDX59Q5T1V6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.54■■□□□ 1.848e-6■■■■■ 27.9
DDX59Q5T1V6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.36■■□□□ 1.658e-6■■■■■ 27.9
DDX59Q5T1V6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.628e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.548e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.438e-6■■■■■ 27.9
DDX59Q5T1V6 TSPAN4-217ENST00000527644 968 ntTSL 223.78■■□□□ 1.48e-6■■■■■ 27.9
DDX59Q5T1V6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.298e-6■■■■■ 27.9
DDX59Q5T1V6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.13■■□□□ 1.298e-6■■■■■ 27.9
DDX59Q5T1V6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.038e-6■■■■■ 27.9
DDX59Q5T1V6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.16■□□□□ 0.988e-6■■■■■ 27.9
DDX59Q5T1V6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.958e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-205ENST00000598159 747 ntTSL 320.63■□□□□ 0.898e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-209ENST00000474416 561 ntTSL 220.34■□□□□ 0.858e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-209ENST00000601357 606 ntTSL 520.34■□□□□ 0.858e-6■■■■■ 27.9
DDX59Q5T1V6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.828e-6■■■■■ 27.9
DDX59Q5T1V6 AATK-207ENST00000573441 581 ntTSL 519.67■□□□□ 0.748e-6■■■■■ 27.9
DDX59Q5T1V6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.58■□□□□ 0.728e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.4■□□□□ 0.78e-6■■■■■ 27.9
DDX59Q5T1V6 AATK-202ENST00000374792 4938 ntTSL 219.13■□□□□ 0.658e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.91■□□□□ 0.628e-6■■■■■ 27.9
DDX59Q5T1V6 COL9A3-207ENST00000467819 993 ntTSL 1 (best)18.77■□□□□ 0.68e-6■■■■■ 27.9
DDX59Q5T1V6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.598e-6■■■■■ 27.9
DDX59Q5T1V6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.588e-6■■■■■ 27.9
DDX59Q5T1V6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.568e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.568e-6■■■■■ 27.9
DDX59Q5T1V6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.51■□□□□ 0.558e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-208ENST00000456210 2065 ntTSL 218.51■□□□□ 0.558e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-203ENST00000437486 622 ntTSL 518.39■□□□□ 0.538e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.21■□□□□ 0.518e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.2■□□□□ 0.58e-6■■■■■ 27.9
DDX59Q5T1V6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.12■□□□□ 0.498e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.08■□□□□ 0.488e-6■■■■■ 27.9
Retrieved 100 of 7,289 protein–RNA pairs in 256 ms