RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 NISCHQ9Y2I1 1504 aa56.16■■■■■ 6.58
HMG20B-205ENST00000435022 CCDC180Q9P1Z9 1646 aa50.33■■■■■ 5.65
HMG20B-205ENST00000435022 ABCC9O60706 1549 aa50.15■■■■■ 5.62
HMG20B-205ENST00000435022 RB1CC1Q8TDY2 1594 aa47.75■■■■■ 5.24
HMG20B-205ENST00000435022 NACADO15069 1562 aa47.48■■■■■ 5.19
HMG20B-205ENST00000435022 DCAF8L2P0C7V8 631 aa47.11■■■■■ 5.13
HMG20B-205ENST00000435022 DNAJC5BQ9UF47 199 aa46.96■■■■■ 5.11
HMG20B-205ENST00000435022 MYO15BQ96JP2 1530 aa46.91■■■■■ 5.1
HMG20B-205ENST00000435022 UNC13AQ9UPW8 1703 aa46.84■■■■■ 5.09
HMG20B-205ENST00000435022 PABPN1Q86U42 306 aaKnown RBP eCLIP46.67■■■■■ 5.06
HMG20B-205ENST00000435022 ZCCHC6Q5VYS8 1495 aaKnown RBP46.62■■■■■ 5.05
HMG20B-205ENST00000435022 BICRAQ9NZM4 1560 aa46.52■■■■■ 5.04
HMG20B-205ENST00000435022 DCAF1Q9Y4B6 1507 aa46.38■■■■■ 5.02
HMG20B-205ENST00000435022 SCRIBQ14160 1630 aa45.88■■■■■ 4.94
HMG20B-205ENST00000435022 SHROOM4Q9ULL8 1493 aa45.76■■■■■ 4.92
HMG20B-205ENST00000435022 CC2D2AQ9P2K1 1620 aa45.34■■■■■ 4.85
HMG20B-205ENST00000435022 EIF4G1Q04637 1599 aaKnown RBP45.28■■■■■ 4.84
HMG20B-205ENST00000435022 CECR2Q9BXF3 1484 aa45.12■■■■■ 4.81
HMG20B-205ENST00000435022 NCAPD3P42695 1498 aa43.85■■■■■ 4.61
HMG20B-205ENST00000435022 SMARCA4P51532 1647 aa43.8■■■■■ 4.6
HMG20B-205ENST00000435022 ATAD2BQ9ULI0 1458 aa43.76■■■■■ 4.6
HMG20B-205ENST00000435022 SMARCA2P51531 1590 aa43.6■■■■■ 4.57
HMG20B-205ENST00000435022 HMGXB3Q12766 1538 aa43.57■■■■■ 4.56
HMG20B-205ENST00000435022 BAZ1AQ9NRL2 1556 aaPredicted RBP43.54■■■■■ 4.56
HMG20B-205ENST00000435022 PEG3Q9GZU2 1588 aa43.37■■■■■ 4.53
HMG20B-205ENST00000435022 MROH2BQ7Z745 1585 aa43.33■■■■■ 4.53
HMG20B-205ENST00000435022 BAZ1BQ9UIG0 1483 aaKnown RBP43.31■■■■■ 4.52
HMG20B-205ENST00000435022 NESP48681 1621 aa43.19■■■■■ 4.51
HMG20B-205ENST00000435022 ERCC6Q03468 1493 aa43.19■■■■■ 4.5
HMG20B-205ENST00000435022 CUX2O14529 1486 aa43.11■■■■■ 4.49
HMG20B-205ENST00000435022 DNAJC5Q9H3Z4 198 aa42.87■■■■■ 4.45
HMG20B-205ENST00000435022 LAMC3Q9Y6N6 1575 aa42.82■■■■■ 4.45
HMG20B-205ENST00000435022 WIZO95785 1651 aa42.81■■■■■ 4.44
HMG20B-205ENST00000435022 THOC2Q8NI27 1593 aaKnown RBP42.74■■■■■ 4.43
HMG20B-205ENST00000435022 KIF21AQ7Z4S6 1674 aa42.64■■■■■ 4.42
HMG20B-205ENST00000435022 PDS5BQ9NTI5 1447 aa42.49■■■■■ 4.39
HMG20B-205ENST00000435022 CADPSQ9ULU8 1353 aa42.49■■■■■ 4.39
HMG20B-205ENST00000435022 RSF1Q96T23 1441 aaPredicted RBP42.45■■■■■ 4.39
HMG20B-205ENST00000435022 TOP2AP11388 1531 aaKnown RBP42.25■■■■■ 4.35
HMG20B-205ENST00000435022 MRC2Q9UBG0 1479 aa42.2■■■■■ 4.35
HMG20B-205ENST00000435022 WDR62O43379 1518 aa42.15■■■■■ 4.34
HMG20B-205ENST00000435022 CFTRP13569 1480 aa42.1■■■■■ 4.33
HMG20B-205ENST00000435022 CEP164Q9UPV0 1460 aa42.04■■■■■ 4.32
HMG20B-205ENST00000435022 FANCD2Q9BXW9 1451 aa42.04■■■■■ 4.32
HMG20B-205ENST00000435022 URB2Q14146 1524 aaKnown RBP41.76■■■■■ 4.28
HMG20B-205ENST00000435022 CCDC88BA6NC98 1476 aa41.75■■■■■ 4.27
HMG20B-205ENST00000435022 PRDM2Q13029 1718 aa41.72■■■■■ 4.27
HMG20B-205ENST00000435022 TOPBP1Q92547 1522 aa41.3■■■■■ 4.2
HMG20B-205ENST00000435022 ZNF608Q9ULD9 1512 aaPredicted RBP41.22■■■■■ 4.19
HMG20B-205ENST00000435022 IFT140Q96RY7 1462 aa41.2■■■■■ 4.19
HMG20B-205ENST00000435022 DNMBPQ6XZF7 1577 aa41.15■■■■■ 4.18
HMG20B-205ENST00000435022 ABCC8Q09428 1581 aa41.08■■■■■ 4.17
HMG20B-205ENST00000435022 OSCARQ8IYS5 282 aa41.06■■■■■ 4.16
HMG20B-205ENST00000435022 TRIM41Q8WV44 630 aa41■■■■■ 4.15
HMG20B-205ENST00000435022 EIF4G3O43432 1585 aaKnown RBP40.99■■■■■ 4.15
HMG20B-205ENST00000435022 TARBP1Q13395 1621 aaKnown RBP40.96■■■■■ 4.15
HMG20B-205ENST00000435022 POLA1P09884 1462 aaPredicted RBP40.9■■■■■ 4.14
HMG20B-205ENST00000435022 AQRO60306 1485 aaKnown RBP eCLIP40.8■■■■■ 4.127e-8■■■■■ 29.4
HMG20B-205ENST00000435022 RAD54L2Q9Y4B4 1467 aa40.75■■■■■ 4.11
HMG20B-205ENST00000435022 CUX1P39880 1505 aa40.69■■■■■ 4.1
HMG20B-205ENST00000435022 RIMBP3CA6NJZ7 1639 aa40.69■■■■■ 4.1
HMG20B-205ENST00000435022 RIMBP3BA6NNM3 1639 aa40.69■■■■■ 4.1
HMG20B-205ENST00000435022 RIMBP3Q9UFD9 1639 aa40.69■■■■■ 4.1
HMG20B-205ENST00000435022 CHD1O14646 1710 aa40.66■■■■■ 4.1
HMG20B-205ENST00000435022 FGD5Q6ZNL6 1462 aa40.65■■■■■ 4.1
HMG20B-205ENST00000435022 SOGA1O94964 1423 aa40.62■■■■■ 4.09
HMG20B-205ENST00000435022 TDRD9Q8NDG6 1382 aaKnown RBP40.56■■■■■ 4.08
HMG20B-205ENST00000435022 ARHGEF11O15085 1522 aa40.56■■■■■ 4.08
HMG20B-205ENST00000435022 SUPT5HO00267 1087 aaKnown RBP40.55■■■■■ 4.08
HMG20B-205ENST00000435022 WDR97A6NE52 1622 aa40.46■■■■■ 4.07
HMG20B-205ENST00000435022 SNAPC4Q5SXM2 1469 aa40.41■■■■■ 4.06
HMG20B-205ENST00000435022 FBLN2P98095 1184 aa40.35■■■■■ 4.05
HMG20B-205ENST00000435022 GRIN2BQ13224 1484 aa40.27■■■■■ 4.04
HMG20B-205ENST00000435022 MAGI1Q96QZ7 1491 aaPredicted RBP40.26■■■■■ 4.04
HMG20B-205ENST00000435022 CLASP1Q7Z460 1538 aa40.21■■■■■ 4.03
HMG20B-205ENST00000435022 PBRM1Q86U86 1689 aa40.21■■■■■ 4.03
HMG20B-205ENST00000435022 ARAP1Q96P48 1450 aa40.21■■■■■ 4.03
HMG20B-205ENST00000435022 ABCA10Q8WWZ4 1543 aa40.19■■■■■ 4.02
HMG20B-205ENST00000435022 ABCA5Q8WWZ7 1642 aa40.18■■■■■ 4.02
HMG20B-205ENST00000435022 GAPVD1Q14C86 1478 aa40.15■■■■■ 4.02
HMG20B-205ENST00000435022 SYNJ2O15056 1496 aa40.13■■■■■ 4.02
HMG20B-205ENST00000435022 CYB5RLQ6IPT4 315 aa40.12■■■■■ 4.01
HMG20B-205ENST00000435022 SYNJ1O43426 1573 aa40.09■■■■■ 4.01
HMG20B-205ENST00000435022 CHMP7Q8WUX9 453 aaPredicted RBP40.08■■■■■ 4.01
HMG20B-205ENST00000435022 BIVM-ERCC5R4GMW8 1640 aa40.08■■■■■ 4.01
HMG20B-205ENST00000435022 TOP2BQ02880 1626 aa40.04■■■■■ 4
HMG20B-205ENST00000435022 WRNQ14191 1432 aaPredicted RBP eCLIP39.98■■■■□ 3.99
HMG20B-205ENST00000435022 ADAMTS12P58397 1594 aa39.85■■■■□ 3.97
HMG20B-205ENST00000435022 GRIN2AQ12879 1464 aa39.79■■■■□ 3.96
HMG20B-205ENST00000435022 CEP170Q5SW79 1584 aa39.72■■■■□ 3.95
HMG20B-205ENST00000435022 NUP160Q12769 1436 aa39.67■■■■□ 3.94
HMG20B-205ENST00000435022 ERICH3Q5RHP9 1530 aa39.66■■■■□ 3.94
HMG20B-205ENST00000435022 ERCC6L2Q5T890 1561 aa39.65■■■■□ 3.94
HMG20B-205ENST00000435022 FHAD1B1AJZ9 1412 aa39.65■■■■□ 3.94
HMG20B-205ENST00000435022 TRHP20396 242 aaPredicted RBP39.55■■■■□ 3.92
HMG20B-205ENST00000435022 SHROOM2Q13796 1616 aa39.53■■■■□ 3.92
HMG20B-205ENST00000435022 RUSC2Q8N2Y8 1516 aa39.3■■■■□ 3.88
HMG20B-205ENST00000435022 PRG4Q92954 1404 aaPredicted RBP39.22■■■■□ 3.87
HMG20B-205ENST00000435022 IGF1RP08069 1367 aa39.19■■■■□ 3.86
HMG20B-205ENST00000435022 KIF27Q86VH2 1401 aa39.15■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms