RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
CNOT3-205ENST00000457463 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
CNOT3-205ENST00000457463 ABCC9O60706 1549 aa25.65■■□□□ 1.7
CNOT3-205ENST00000457463 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
CNOT3-205ENST00000457463 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
CNOT3-205ENST00000457463 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
CNOT3-205ENST00000457463 NACADO15069 1562 aa24.58■■□□□ 1.52
CNOT3-205ENST00000457463 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
CNOT3-205ENST00000457463 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
CNOT3-205ENST00000457463 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
CNOT3-205ENST00000457463 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CNOT3-205ENST00000457463 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
CNOT3-205ENST00000457463 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
CNOT3-205ENST00000457463 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
CNOT3-205ENST00000457463 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
CNOT3-205ENST00000457463 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
CNOT3-205ENST00000457463 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
CNOT3-205ENST00000457463 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
CNOT3-205ENST00000457463 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
CNOT3-205ENST00000457463 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
CNOT3-205ENST00000457463 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
CNOT3-205ENST00000457463 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
CNOT3-205ENST00000457463 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
CNOT3-205ENST00000457463 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
CNOT3-205ENST00000457463 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
CNOT3-205ENST00000457463 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
CNOT3-205ENST00000457463 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
CNOT3-205ENST00000457463 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
CNOT3-205ENST00000457463 WIZO95785 1651 aa22.57■■□□□ 1.2
CNOT3-205ENST00000457463 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
CNOT3-205ENST00000457463 NESP48681 1621 aa22.24■■□□□ 1.15
CNOT3-205ENST00000457463 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
CNOT3-205ENST00000457463 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
CNOT3-205ENST00000457463 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
CNOT3-205ENST00000457463 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
CNOT3-205ENST00000457463 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
CNOT3-205ENST00000457463 CFTRP13569 1480 aa21.97■■□□□ 1.11
CNOT3-205ENST00000457463 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
CNOT3-205ENST00000457463 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
CNOT3-205ENST00000457463 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
CNOT3-205ENST00000457463 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
CNOT3-205ENST00000457463 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
CNOT3-205ENST00000457463 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CNOT3-205ENST00000457463 CUX2O14529 1486 aa21.72■■□□□ 1.07
CNOT3-205ENST00000457463 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
CNOT3-205ENST00000457463 WDR62O43379 1518 aa21.65■■□□□ 1.06
CNOT3-205ENST00000457463 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
CNOT3-205ENST00000457463 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
CNOT3-205ENST00000457463 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
CNOT3-205ENST00000457463 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
CNOT3-205ENST00000457463 CUX1P39880 1505 aa21.39■■□□□ 1.02
CNOT3-205ENST00000457463 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
CNOT3-205ENST00000457463 IFT140Q96RY7 1462 aa21.32■■□□□ 1
CNOT3-205ENST00000457463 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
CNOT3-205ENST00000457463 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
CNOT3-205ENST00000457463 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
CNOT3-205ENST00000457463 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
CNOT3-205ENST00000457463 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
CNOT3-205ENST00000457463 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
CNOT3-205ENST00000457463 SOGA1O94964 1423 aa21.24■□□□□ 0.99
CNOT3-205ENST00000457463 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.982e-8■■■■■ 33.4
CNOT3-205ENST00000457463 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
CNOT3-205ENST00000457463 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
CNOT3-205ENST00000457463 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
CNOT3-205ENST00000457463 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.97
CNOT3-205ENST00000457463 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
CNOT3-205ENST00000457463 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
CNOT3-205ENST00000457463 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
CNOT3-205ENST00000457463 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
CNOT3-205ENST00000457463 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
CNOT3-205ENST00000457463 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
CNOT3-205ENST00000457463 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
CNOT3-205ENST00000457463 FBLN2P98095 1184 aa20.91■□□□□ 0.94
CNOT3-205ENST00000457463 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
CNOT3-205ENST00000457463 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
CNOT3-205ENST00000457463 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
CNOT3-205ENST00000457463 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
CNOT3-205ENST00000457463 CHD1O14646 1710 aa20.84■□□□□ 0.93
CNOT3-205ENST00000457463 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
CNOT3-205ENST00000457463 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
CNOT3-205ENST00000457463 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
CNOT3-205ENST00000457463 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
CNOT3-205ENST00000457463 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
CNOT3-205ENST00000457463 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
CNOT3-205ENST00000457463 IGF1RP08069 1367 aa20.76■□□□□ 0.91
CNOT3-205ENST00000457463 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
CNOT3-205ENST00000457463 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
CNOT3-205ENST00000457463 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
CNOT3-205ENST00000457463 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
CNOT3-205ENST00000457463 CEP170Q5SW79 1584 aa20.62■□□□□ 0.89
CNOT3-205ENST00000457463 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
CNOT3-205ENST00000457463 NUP160Q12769 1436 aa20.61■□□□□ 0.89
CNOT3-205ENST00000457463 CUL7Q14999 1698 aa20.58■□□□□ 0.88
CNOT3-205ENST00000457463 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CNOT3-205ENST00000457463 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
CNOT3-205ENST00000457463 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
CNOT3-205ENST00000457463 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
CNOT3-205ENST00000457463 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
CNOT3-205ENST00000457463 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
CNOT3-205ENST00000457463 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms