RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 NISCHQ9Y2I1 1504 aa17.21■□□□□ 0.34
SUMO3-202ENST00000397893 ABCC9O60706 1549 aa15.4■□□□□ 0.06
SUMO3-202ENST00000397893 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
SUMO3-202ENST00000397893 RB1CC1Q8TDY2 1594 aa14.62□□□□□ -0.07
SUMO3-202ENST00000397893 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
SUMO3-202ENST00000397893 NACADO15069 1562 aa14.56□□□□□ -0.08
SUMO3-202ENST00000397893 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
SUMO3-202ENST00000397893 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
SUMO3-202ENST00000397893 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
SUMO3-202ENST00000397893 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
SUMO3-202ENST00000397893 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
SUMO3-202ENST00000397893 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
SUMO3-202ENST00000397893 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
SUMO3-202ENST00000397893 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
SUMO3-202ENST00000397893 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
SUMO3-202ENST00000397893 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
SUMO3-202ENST00000397893 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
SUMO3-202ENST00000397893 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
SUMO3-202ENST00000397893 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
SUMO3-202ENST00000397893 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
SUMO3-202ENST00000397893 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
SUMO3-202ENST00000397893 ATAD2BQ9ULI0 1458 aa13.45□□□□□ -0.26
SUMO3-202ENST00000397893 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
SUMO3-202ENST00000397893 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
SUMO3-202ENST00000397893 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
SUMO3-202ENST00000397893 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
SUMO3-202ENST00000397893 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
SUMO3-202ENST00000397893 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
SUMO3-202ENST00000397893 CUX2O14529 1486 aa13.28□□□□□ -0.28
SUMO3-202ENST00000397893 NESP48681 1621 aa13.26□□□□□ -0.29
SUMO3-202ENST00000397893 MROH2BQ7Z745 1585 aa13.26□□□□□ -0.29
SUMO3-202ENST00000397893 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
SUMO3-202ENST00000397893 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
SUMO3-202ENST00000397893 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
SUMO3-202ENST00000397893 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
SUMO3-202ENST00000397893 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
SUMO3-202ENST00000397893 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
SUMO3-202ENST00000397893 WIZO95785 1651 aa13.04□□□□□ -0.32
SUMO3-202ENST00000397893 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
SUMO3-202ENST00000397893 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
SUMO3-202ENST00000397893 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
SUMO3-202ENST00000397893 CFTRP13569 1480 aa12.93□□□□□ -0.34
SUMO3-202ENST00000397893 WDR62O43379 1518 aa12.93□□□□□ -0.34
SUMO3-202ENST00000397893 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.34
SUMO3-202ENST00000397893 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
SUMO3-202ENST00000397893 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
SUMO3-202ENST00000397893 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
SUMO3-202ENST00000397893 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
SUMO3-202ENST00000397893 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
SUMO3-202ENST00000397893 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
SUMO3-202ENST00000397893 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
SUMO3-202ENST00000397893 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
SUMO3-202ENST00000397893 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
SUMO3-202ENST00000397893 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
SUMO3-202ENST00000397893 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
SUMO3-202ENST00000397893 DNMBPQ6XZF7 1577 aa12.58□□□□□ -0.4
SUMO3-202ENST00000397893 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.44e-7■■■□□ 16.4
SUMO3-202ENST00000397893 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
SUMO3-202ENST00000397893 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
SUMO3-202ENST00000397893 RAD54L2Q9Y4B4 1467 aa12.5□□□□□ -0.41
SUMO3-202ENST00000397893 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
SUMO3-202ENST00000397893 SOGA1O94964 1423 aa12.48□□□□□ -0.41
SUMO3-202ENST00000397893 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
SUMO3-202ENST00000397893 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
SUMO3-202ENST00000397893 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
SUMO3-202ENST00000397893 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
SUMO3-202ENST00000397893 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
SUMO3-202ENST00000397893 CUX1P39880 1505 aa12.45□□□□□ -0.42
SUMO3-202ENST00000397893 FGD5Q6ZNL6 1462 aa12.45□□□□□ -0.42
SUMO3-202ENST00000397893 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
SUMO3-202ENST00000397893 FBLN2P98095 1184 aa12.4□□□□□ -0.42
SUMO3-202ENST00000397893 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
SUMO3-202ENST00000397893 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
SUMO3-202ENST00000397893 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
SUMO3-202ENST00000397893 CHD1O14646 1710 aa12.37□□□□□ -0.43
SUMO3-202ENST00000397893 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
SUMO3-202ENST00000397893 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
SUMO3-202ENST00000397893 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
SUMO3-202ENST00000397893 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
SUMO3-202ENST00000397893 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
SUMO3-202ENST00000397893 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
SUMO3-202ENST00000397893 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
SUMO3-202ENST00000397893 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
SUMO3-202ENST00000397893 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
SUMO3-202ENST00000397893 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
SUMO3-202ENST00000397893 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
SUMO3-202ENST00000397893 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
SUMO3-202ENST00000397893 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
SUMO3-202ENST00000397893 GRIN2AQ12879 1464 aa12.21□□□□□ -0.46
SUMO3-202ENST00000397893 NUP160Q12769 1436 aa12.2□□□□□ -0.46
SUMO3-202ENST00000397893 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
SUMO3-202ENST00000397893 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
SUMO3-202ENST00000397893 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
SUMO3-202ENST00000397893 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
SUMO3-202ENST00000397893 ADAMTS12P58397 1594 aa12.17□□□□□ -0.46
SUMO3-202ENST00000397893 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
SUMO3-202ENST00000397893 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
SUMO3-202ENST00000397893 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
SUMO3-202ENST00000397893 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
SUMO3-202ENST00000397893 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms