RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 NISCHQ9Y2I1 1504 aa53.97■■■■■ 6.23
HMG20B-203ENST00000416526 CCDC180Q9P1Z9 1646 aa48.1■■■■■ 5.29
HMG20B-203ENST00000416526 ABCC9O60706 1549 aa47.44■■■■■ 5.18
HMG20B-203ENST00000416526 RB1CC1Q8TDY2 1594 aa45.43■■■■■ 4.86
HMG20B-203ENST00000416526 NACADO15069 1562 aa45.3■■■■■ 4.84
HMG20B-203ENST00000416526 DCAF8L2P0C7V8 631 aa45.2■■■■■ 4.83
HMG20B-203ENST00000416526 MYO15BQ96JP2 1530 aa44.91■■■■■ 4.78
HMG20B-203ENST00000416526 ZCCHC6Q5VYS8 1495 aaKnown RBP44.88■■■■■ 4.78
HMG20B-203ENST00000416526 DCAF1Q9Y4B6 1507 aa44.61■■■■■ 4.73
HMG20B-203ENST00000416526 UNC13AQ9UPW8 1703 aa44.47■■■■■ 4.71
HMG20B-203ENST00000416526 PABPN1Q86U42 306 aaKnown RBP eCLIP44.29■■■■■ 4.681e-8■■■□□ 17.2
HMG20B-203ENST00000416526 BICRAQ9NZM4 1560 aa44.16■■■■■ 4.66
HMG20B-203ENST00000416526 DNAJC5BQ9UF47 199 aa43.93■■■■■ 4.62
HMG20B-203ENST00000416526 SCRIBQ14160 1630 aa43.9■■■■■ 4.62
HMG20B-203ENST00000416526 SHROOM4Q9ULL8 1493 aa43.55■■■■■ 4.56
HMG20B-203ENST00000416526 EIF4G1Q04637 1599 aaKnown RBP42.98■■■■■ 4.47
HMG20B-203ENST00000416526 CC2D2AQ9P2K1 1620 aa42.89■■■■■ 4.46
HMG20B-203ENST00000416526 CECR2Q9BXF3 1484 aa42.65■■■■■ 4.42
HMG20B-203ENST00000416526 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
HMG20B-203ENST00000416526 NCAPD3P42695 1498 aa41.83■■■■■ 4.29
HMG20B-203ENST00000416526 BAZ1AQ9NRL2 1556 aaPredicted RBP41.81■■■■■ 4.28
HMG20B-203ENST00000416526 ATAD2BQ9ULI0 1458 aa41.81■■■■■ 4.28
HMG20B-203ENST00000416526 SMARCA2P51531 1590 aa41.7■■■■■ 4.27
HMG20B-203ENST00000416526 MROH2BQ7Z745 1585 aa41.61■■■■■ 4.25
HMG20B-203ENST00000416526 HMGXB3Q12766 1538 aa41.58■■■■■ 4.25
HMG20B-203ENST00000416526 PEG3Q9GZU2 1588 aa41.54■■■■■ 4.24
HMG20B-203ENST00000416526 BAZ1BQ9UIG0 1483 aaKnown RBP41.42■■■■■ 4.22
HMG20B-203ENST00000416526 WIZO95785 1651 aa41.15■■■■■ 4.18
HMG20B-203ENST00000416526 RSF1Q96T23 1441 aaPredicted RBP41■■■■■ 4.15
HMG20B-203ENST00000416526 NESP48681 1621 aa40.98■■■■■ 4.15
HMG20B-203ENST00000416526 ERCC6Q03468 1493 aa40.86■■■■■ 4.13
HMG20B-203ENST00000416526 LAMC3Q9Y6N6 1575 aa40.76■■■■■ 4.12
HMG20B-203ENST00000416526 TOP2AP11388 1531 aaKnown RBP40.65■■■■■ 4.1
HMG20B-203ENST00000416526 CADPSQ9ULU8 1353 aa40.59■■■■■ 4.09
HMG20B-203ENST00000416526 CUX2O14529 1486 aa40.57■■■■■ 4.08
HMG20B-203ENST00000416526 PDS5BQ9NTI5 1447 aa40.48■■■■■ 4.07
HMG20B-203ENST00000416526 KIF21AQ7Z4S6 1674 aa40.47■■■■■ 4.07
HMG20B-203ENST00000416526 THOC2Q8NI27 1593 aaKnown RBP40.42■■■■■ 4.06
HMG20B-203ENST00000416526 CFTRP13569 1480 aa40.29■■■■■ 4.04
HMG20B-203ENST00000416526 CCDC88BA6NC98 1476 aa40.2■■■■■ 4.03
HMG20B-203ENST00000416526 FANCD2Q9BXW9 1451 aa40.12■■■■■ 4.01
HMG20B-203ENST00000416526 MRC2Q9UBG0 1479 aa40.12■■■■■ 4.01
HMG20B-203ENST00000416526 CEP164Q9UPV0 1460 aa40.08■■■■■ 4.01
HMG20B-203ENST00000416526 WDR62O43379 1518 aa40.01■■■■■ 4
HMG20B-203ENST00000416526 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
HMG20B-203ENST00000416526 URB2Q14146 1524 aaKnown RBP39.78■■■■□ 3.96
HMG20B-203ENST00000416526 DNAJC5Q9H3Z4 198 aa39.77■■■■□ 3.96
HMG20B-203ENST00000416526 SUPT5HO00267 1087 aaKnown RBP39.67■■■■□ 3.94
HMG20B-203ENST00000416526 TOPBP1Q92547 1522 aa39.45■■■■□ 3.91
HMG20B-203ENST00000416526 DNMBPQ6XZF7 1577 aa39.37■■■■□ 3.89
HMG20B-203ENST00000416526 ABCC8Q09428 1581 aa39.36■■■■□ 3.89
HMG20B-203ENST00000416526 IFT140Q96RY7 1462 aa39.26■■■■□ 3.88
HMG20B-203ENST00000416526 ZNF608Q9ULD9 1512 aaPredicted RBP39.18■■■■□ 3.86
HMG20B-203ENST00000416526 POLA1P09884 1462 aaPredicted RBP39.11■■■■□ 3.85
HMG20B-203ENST00000416526 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.85
HMG20B-203ENST00000416526 CUX1P39880 1505 aa39.05■■■■□ 3.84
HMG20B-203ENST00000416526 EIF4G3O43432 1585 aaKnown RBP38.98■■■■□ 3.83
HMG20B-203ENST00000416526 FGD5Q6ZNL6 1462 aa38.96■■■■□ 3.83
HMG20B-203ENST00000416526 RAD54L2Q9Y4B4 1467 aa38.96■■■■□ 3.83
HMG20B-203ENST00000416526 SOGA1O94964 1423 aa38.91■■■■□ 3.82
HMG20B-203ENST00000416526 AQRO60306 1485 aaKnown RBP eCLIP38.9■■■■□ 3.826e-8■■■■■ 34.8
HMG20B-203ENST00000416526 OSCARQ8IYS5 282 aa38.82■■■■□ 3.8
HMG20B-203ENST00000416526 TDRD9Q8NDG6 1382 aaKnown RBP38.77■■■■□ 3.8
HMG20B-203ENST00000416526 WDR97A6NE52 1622 aa38.67■■■■□ 3.78
HMG20B-203ENST00000416526 WRNQ14191 1432 aaPredicted RBP eCLIP38.63■■■■□ 3.78
HMG20B-203ENST00000416526 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
HMG20B-203ENST00000416526 BIVM-ERCC5R4GMW8 1640 aa38.6■■■■□ 3.77
HMG20B-203ENST00000416526 TOP2BQ02880 1626 aa38.6■■■■□ 3.77
HMG20B-203ENST00000416526 CHD1O14646 1710 aa38.57■■■■□ 3.76
HMG20B-203ENST00000416526 ABCA10Q8WWZ4 1543 aa38.54■■■■□ 3.76
HMG20B-203ENST00000416526 SNAPC4Q5SXM2 1469 aa38.51■■■■□ 3.76
HMG20B-203ENST00000416526 GRIN2BQ13224 1484 aa38.49■■■■□ 3.75
HMG20B-203ENST00000416526 GAPVD1Q14C86 1478 aa38.46■■■■□ 3.75
HMG20B-203ENST00000416526 FBLN2P98095 1184 aa38.45■■■■□ 3.75
HMG20B-203ENST00000416526 ABCA5Q8WWZ7 1642 aa38.45■■■■□ 3.75
HMG20B-203ENST00000416526 MAGI1Q96QZ7 1491 aaPredicted RBP38.42■■■■□ 3.74
HMG20B-203ENST00000416526 PBRM1Q86U86 1689 aa38.41■■■■□ 3.74
HMG20B-203ENST00000416526 TRIM41Q8WV44 630 aa38.3■■■■□ 3.72
HMG20B-203ENST00000416526 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
HMG20B-203ENST00000416526 CHMP7Q8WUX9 453 aaPredicted RBP38.29■■■■□ 3.72
HMG20B-203ENST00000416526 RIMBP3CA6NJZ7 1639 aa38.28■■■■□ 3.72
HMG20B-203ENST00000416526 RIMBP3BA6NNM3 1639 aa38.28■■■■□ 3.72
HMG20B-203ENST00000416526 RIMBP3Q9UFD9 1639 aa38.28■■■■□ 3.72
HMG20B-203ENST00000416526 ARHGEF11O15085 1522 aa38.23■■■■□ 3.71
HMG20B-203ENST00000416526 CLASP1Q7Z460 1538 aa38.14■■■■□ 3.7
HMG20B-203ENST00000416526 ADAMTS12P58397 1594 aa38.1■■■■□ 3.69
HMG20B-203ENST00000416526 ERICH3Q5RHP9 1530 aa38.07■■■■□ 3.68
HMG20B-203ENST00000416526 GRIN2AQ12879 1464 aa38.01■■■■□ 3.67
HMG20B-203ENST00000416526 FHAD1B1AJZ9 1412 aa37.99■■■■□ 3.67
HMG20B-203ENST00000416526 ARAP1Q96P48 1450 aa37.92■■■■□ 3.66
HMG20B-203ENST00000416526 CYB5RLQ6IPT4 315 aa37.89■■■■□ 3.66
HMG20B-203ENST00000416526 NUP160Q12769 1436 aa37.87■■■■□ 3.65
HMG20B-203ENST00000416526 CEP170Q5SW79 1584 aa37.87■■■■□ 3.65
HMG20B-203ENST00000416526 KIF27Q86VH2 1401 aa37.83■■■■□ 3.65
HMG20B-203ENST00000416526 IGF1RP08069 1367 aa37.77■■■■□ 3.64
HMG20B-203ENST00000416526 CUL7Q14999 1698 aa37.64■■■■□ 3.62
HMG20B-203ENST00000416526 ERCC6L2Q5T890 1561 aa37.63■■■■□ 3.62
HMG20B-203ENST00000416526 SHROOM2Q13796 1616 aa37.63■■■■□ 3.61
HMG20B-203ENST00000416526 RUSC2Q8N2Y8 1516 aa37.55■■■■□ 3.6
HMG20B-203ENST00000416526 CARMIL1Q5VZK9 1371 aa37.51■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms