RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 NISCHQ9Y2I1 1504 aa44.83■■■■■ 4.77
GTF3C5-201ENST00000342018 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
GTF3C5-201ENST00000342018 ABCC9O60706 1549 aa37.76■■■■□ 3.64
GTF3C5-201ENST00000342018 ZCCHC6Q5VYS8 1495 aaKnown RBP37.54■■■■□ 3.6
GTF3C5-201ENST00000342018 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
GTF3C5-201ENST00000342018 DCAF1Q9Y4B6 1507 aa36.99■■■■□ 3.51
GTF3C5-201ENST00000342018 NACADO15069 1562 aa36.74■■■■□ 3.47
GTF3C5-201ENST00000342018 MYO15BQ96JP2 1530 aa36.74■■■■□ 3.47
GTF3C5-201ENST00000342018 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
GTF3C5-201ENST00000342018 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
GTF3C5-201ENST00000342018 SCRIBQ14160 1630 aa36.17■■■■□ 3.38
GTF3C5-201ENST00000342018 UNC13AQ9UPW8 1703 aa35.82■■■■□ 3.32
GTF3C5-201ENST00000342018 PABPN1Q86U42 306 aaKnown RBP eCLIP35.54■■■■□ 3.281e-8■■■□□ 15.2
GTF3C5-201ENST00000342018 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
GTF3C5-201ENST00000342018 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
GTF3C5-201ENST00000342018 SUPT5HO00267 1087 aaKnown RBP34.72■■■■□ 3.15
GTF3C5-201ENST00000342018 BAZ1AQ9NRL2 1556 aaPredicted RBP34.66■■■■□ 3.14
GTF3C5-201ENST00000342018 MROH2BQ7Z745 1585 aa34.64■■■■□ 3.14
GTF3C5-201ENST00000342018 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
GTF3C5-201ENST00000342018 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
GTF3C5-201ENST00000342018 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
GTF3C5-201ENST00000342018 WIZO95785 1651 aa34.35■■■■□ 3.09
GTF3C5-201ENST00000342018 ATAD2BQ9ULI0 1458 aa34.15■■■■□ 3.06
GTF3C5-201ENST00000342018 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
GTF3C5-201ENST00000342018 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
GTF3C5-201ENST00000342018 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
GTF3C5-201ENST00000342018 BAZ1BQ9UIG0 1483 aaKnown RBP33.96■■■■□ 3.03
GTF3C5-201ENST00000342018 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
GTF3C5-201ENST00000342018 NCAPD3P42695 1498 aa33.91■■■■□ 3.02
GTF3C5-201ENST00000342018 HMGXB3Q12766 1538 aa33.82■■■■□ 3
GTF3C5-201ENST00000342018 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
GTF3C5-201ENST00000342018 CCDC88BA6NC98 1476 aa33.61■■■□□ 2.97
GTF3C5-201ENST00000342018 CADPSQ9ULU8 1353 aa33.05■■■□□ 2.88
GTF3C5-201ENST00000342018 CFTRP13569 1480 aa33.03■■■□□ 2.88
GTF3C5-201ENST00000342018 NESP48681 1621 aa32.97■■■□□ 2.87
GTF3C5-201ENST00000342018 CHIC1Q5VXU3 224 aa32.87■■■□□ 2.85
GTF3C5-201ENST00000342018 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
GTF3C5-201ENST00000342018 PRDM2Q13029 1718 aa32.81■■■□□ 2.84
GTF3C5-201ENST00000342018 ABCC8Q09428 1581 aa32.77■■■□□ 2.84
GTF3C5-201ENST00000342018 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.82
GTF3C5-201ENST00000342018 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
GTF3C5-201ENST00000342018 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
GTF3C5-201ENST00000342018 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.811e-6■■■■■ 58.5
GTF3C5-201ENST00000342018 KIF21AQ7Z4S6 1674 aa32.54■■■□□ 2.8
GTF3C5-201ENST00000342018 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
GTF3C5-201ENST00000342018 SYNJ1O43426 1573 aa32.47■■■□□ 2.79
GTF3C5-201ENST00000342018 ERCC6Q03468 1493 aa32.45■■■□□ 2.78
GTF3C5-201ENST00000342018 CUX1P39880 1505 aa32.42■■■□□ 2.78
GTF3C5-201ENST00000342018 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
GTF3C5-201ENST00000342018 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
GTF3C5-201ENST00000342018 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
GTF3C5-201ENST00000342018 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
GTF3C5-201ENST00000342018 TOPBP1Q92547 1522 aa32.27■■■□□ 2.76
GTF3C5-201ENST00000342018 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.76
GTF3C5-201ENST00000342018 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
GTF3C5-201ENST00000342018 THOC2Q8NI27 1593 aaKnown RBP32.12■■■□□ 2.73
GTF3C5-201ENST00000342018 FAM9AQ8IZU1 332 aaPredicted RBP32.1■■■□□ 2.73
GTF3C5-201ENST00000342018 WDR62O43379 1518 aa32.09■■■□□ 2.73
GTF3C5-201ENST00000342018 POLA1P09884 1462 aaPredicted RBP32.08■■■□□ 2.73
GTF3C5-201ENST00000342018 SOGA1O94964 1423 aa32.04■■■□□ 2.72
GTF3C5-201ENST00000342018 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
GTF3C5-201ENST00000342018 RUSC2Q8N2Y8 1516 aa31.95■■■□□ 2.71
GTF3C5-201ENST00000342018 CUX2O14529 1486 aa31.88■■■□□ 2.69
GTF3C5-201ENST00000342018 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
GTF3C5-201ENST00000342018 KIF27Q86VH2 1401 aa31.82■■■□□ 2.68
GTF3C5-201ENST00000342018 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
GTF3C5-201ENST00000342018 EEA1Q15075 1411 aa31.8■■■□□ 2.68
GTF3C5-201ENST00000342018 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
GTF3C5-201ENST00000342018 WDR97A6NE52 1622 aa31.76■■■□□ 2.68
GTF3C5-201ENST00000342018 TDRD9Q8NDG6 1382 aaKnown RBP31.76■■■□□ 2.67
GTF3C5-201ENST00000342018 CSRNP3Q8WYN3 585 aa31.75■■■□□ 2.67
GTF3C5-201ENST00000342018 EHMT2Q96KQ7 1210 aa31.73■■■□□ 2.67
GTF3C5-201ENST00000342018 LOC105371045A0A1W2PR82 267 aa31.66■■■□□ 2.66
GTF3C5-201ENST00000342018 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
GTF3C5-201ENST00000342018 AQRO60306 1485 aaKnown RBP eCLIP31.63■■■□□ 2.652e-7■■■■■ 34.1
GTF3C5-201ENST00000342018 GAPVD1Q14C86 1478 aa31.62■■■□□ 2.65
GTF3C5-201ENST00000342018 ABCA5Q8WWZ7 1642 aa31.62■■■□□ 2.65
GTF3C5-201ENST00000342018 IGF1RP08069 1367 aa31.57■■■□□ 2.65
GTF3C5-201ENST00000342018 EIF4G3O43432 1585 aaKnown RBP31.52■■■□□ 2.64
GTF3C5-201ENST00000342018 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
GTF3C5-201ENST00000342018 ERICH3Q5RHP9 1530 aa31.45■■■□□ 2.62
GTF3C5-201ENST00000342018 GRIN2BQ13224 1484 aa31.44■■■□□ 2.62
GTF3C5-201ENST00000342018 CARMIL1Q5VZK9 1371 aa31.43■■■□□ 2.62
GTF3C5-201ENST00000342018 PRXQ9BXM0 1461 aa31.43■■■□□ 2.62
GTF3C5-201ENST00000342018 KIF21BO75037 1637 aa31.42■■■□□ 2.62
GTF3C5-201ENST00000342018 RAPGEF2Q9Y4G8 1499 aa31.4■■■□□ 2.62
GTF3C5-201ENST00000342018 GOLGA3Q08378 1498 aa31.38■■■□□ 2.61
GTF3C5-201ENST00000342018 UBTFP17480 764 aaKnown RBP31.37■■■□□ 2.61
GTF3C5-201ENST00000342018 CUL7Q14999 1698 aa31.36■■■□□ 2.61
GTF3C5-201ENST00000342018 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
GTF3C5-201ENST00000342018 ADAMTS12P58397 1594 aa31.26■■■□□ 2.59
GTF3C5-201ENST00000342018 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
GTF3C5-201ENST00000342018 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
GTF3C5-201ENST00000342018 FBLN2P98095 1184 aa31.18■■■□□ 2.58
GTF3C5-201ENST00000342018 TNIKQ9UKE5 1360 aa31.16■■■□□ 2.58
GTF3C5-201ENST00000342018 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
GTF3C5-201ENST00000342018 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
GTF3C5-201ENST00000342018 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
GTF3C5-201ENST00000342018 GRIN2AQ12879 1464 aa31.05■■■□□ 2.56
GTF3C5-201ENST00000342018 CEP162Q5TB80 1403 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms