RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 NISCHQ9Y2I1 1504 aa40.24■■■■■ 4.03
CNOT3-207ENST00000496327 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
CNOT3-207ENST00000496327 ABCC9O60706 1549 aa34.82■■■■□ 3.16
CNOT3-207ENST00000496327 DCAF8L2P0C7V8 631 aa33.59■■■□□ 2.97
CNOT3-207ENST00000496327 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
CNOT3-207ENST00000496327 NACADO15069 1562 aa33.55■■■□□ 2.96
CNOT3-207ENST00000496327 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
CNOT3-207ENST00000496327 MYO15BQ96JP2 1530 aa33.41■■■□□ 2.94
CNOT3-207ENST00000496327 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
CNOT3-207ENST00000496327 UNC13AQ9UPW8 1703 aa32.62■■■□□ 2.81
CNOT3-207ENST00000496327 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
CNOT3-207ENST00000496327 SCRIBQ14160 1630 aa32.57■■■□□ 2.8
CNOT3-207ENST00000496327 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
CNOT3-207ENST00000496327 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
CNOT3-207ENST00000496327 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
CNOT3-207ENST00000496327 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.66
CNOT3-207ENST00000496327 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
CNOT3-207ENST00000496327 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
CNOT3-207ENST00000496327 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
CNOT3-207ENST00000496327 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
CNOT3-207ENST00000496327 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.56
CNOT3-207ENST00000496327 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
CNOT3-207ENST00000496327 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
CNOT3-207ENST00000496327 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
CNOT3-207ENST00000496327 PEG3Q9GZU2 1588 aa30.87■■■□□ 2.53
CNOT3-207ENST00000496327 HMGXB3Q12766 1538 aa30.82■■■□□ 2.52
CNOT3-207ENST00000496327 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.52
CNOT3-207ENST00000496327 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
CNOT3-207ENST00000496327 WIZO95785 1651 aa30.62■■■□□ 2.49
CNOT3-207ENST00000496327 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
CNOT3-207ENST00000496327 NESP48681 1621 aa30.14■■■□□ 2.42
CNOT3-207ENST00000496327 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
CNOT3-207ENST00000496327 LAMC3Q9Y6N6 1575 aa30.1■■■□□ 2.41
CNOT3-207ENST00000496327 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
CNOT3-207ENST00000496327 CCDC88BA6NC98 1476 aa30.02■■■□□ 2.4
CNOT3-207ENST00000496327 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
CNOT3-207ENST00000496327 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
CNOT3-207ENST00000496327 CFTRP13569 1480 aa29.93■■■□□ 2.38
CNOT3-207ENST00000496327 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
CNOT3-207ENST00000496327 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
CNOT3-207ENST00000496327 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
CNOT3-207ENST00000496327 CUX2O14529 1486 aa29.65■■■□□ 2.34
CNOT3-207ENST00000496327 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
CNOT3-207ENST00000496327 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
CNOT3-207ENST00000496327 PRDM2Q13029 1718 aa29.55■■■□□ 2.32
CNOT3-207ENST00000496327 WDR62O43379 1518 aa29.49■■■□□ 2.31
CNOT3-207ENST00000496327 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
CNOT3-207ENST00000496327 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
CNOT3-207ENST00000496327 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
CNOT3-207ENST00000496327 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
CNOT3-207ENST00000496327 CUX1P39880 1505 aa29.09■■■□□ 2.25
CNOT3-207ENST00000496327 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
CNOT3-207ENST00000496327 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
CNOT3-207ENST00000496327 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
CNOT3-207ENST00000496327 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
CNOT3-207ENST00000496327 SOGA1O94964 1423 aa28.93■■■□□ 2.22
CNOT3-207ENST00000496327 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
CNOT3-207ENST00000496327 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
CNOT3-207ENST00000496327 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
CNOT3-207ENST00000496327 TOP2BQ02880 1626 aa28.85■■■□□ 2.21
CNOT3-207ENST00000496327 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
CNOT3-207ENST00000496327 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
CNOT3-207ENST00000496327 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.192e-8■■■■■ 39.6
CNOT3-207ENST00000496327 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
CNOT3-207ENST00000496327 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
CNOT3-207ENST00000496327 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
CNOT3-207ENST00000496327 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
CNOT3-207ENST00000496327 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
CNOT3-207ENST00000496327 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
CNOT3-207ENST00000496327 GRIN2BQ13224 1484 aa28.58■■■□□ 2.17
CNOT3-207ENST00000496327 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
CNOT3-207ENST00000496327 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
CNOT3-207ENST00000496327 MAGI1Q96QZ7 1491 aaPredicted RBP28.48■■■□□ 2.15
CNOT3-207ENST00000496327 OSCARQ8IYS5 282 aa28.46■■■□□ 2.15
CNOT3-207ENST00000496327 FBLN2P98095 1184 aa28.41■■■□□ 2.14
CNOT3-207ENST00000496327 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
CNOT3-207ENST00000496327 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
CNOT3-207ENST00000496327 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
CNOT3-207ENST00000496327 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
CNOT3-207ENST00000496327 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
CNOT3-207ENST00000496327 ERICH3Q5RHP9 1530 aa28.36■■■□□ 2.13
CNOT3-207ENST00000496327 CHD1O14646 1710 aa28.29■■■□□ 2.12
CNOT3-207ENST00000496327 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
CNOT3-207ENST00000496327 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
CNOT3-207ENST00000496327 IGF1RP08069 1367 aa28.24■■■□□ 2.11
CNOT3-207ENST00000496327 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
CNOT3-207ENST00000496327 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
CNOT3-207ENST00000496327 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
CNOT3-207ENST00000496327 CLASP1Q7Z460 1538 aa28.09■■■□□ 2.09
CNOT3-207ENST00000496327 CUL7Q14999 1698 aa28.09■■■□□ 2.09
CNOT3-207ENST00000496327 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
CNOT3-207ENST00000496327 NUP160Q12769 1436 aa28.08■■■□□ 2.09
CNOT3-207ENST00000496327 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
CNOT3-207ENST00000496327 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
CNOT3-207ENST00000496327 EEA1Q15075 1411 aa27.93■■■□□ 2.06
CNOT3-207ENST00000496327 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
CNOT3-207ENST00000496327 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
CNOT3-207ENST00000496327 RIMBP3BA6NNM3 1639 aa27.91■■■□□ 2.06
CNOT3-207ENST00000496327 RIMBP3Q9UFD9 1639 aa27.91■■■□□ 2.06
CNOT3-207ENST00000496327 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms