Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 AC009093.7-201ENST00000623853 1223 ntBASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 AC113367.3-201ENST00000508316 1912 ntBASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 COL6A4P2-202ENST00000504443 2753 ntBASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHMP1AQ9HD42 CSPG4P11-201ENST00000560634 4910 ntBASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MTHFR-210ENST00000641407 2387 ntBASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 AC010327.4-202ENST00000591484 748 ntBASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 AL033527.5-202ENST00000641632 1098 ntBASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.96□□□□□ -0.33
CHMP1AQ9HD42 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHMP1AQ9HD42 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 CICP8-201ENST00000455800 2813 ntBASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.95□□□□□ -0.34
CHMP1AQ9HD42 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms