RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
CMBL-201ENST00000296658 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
CMBL-201ENST00000296658 ZCCHC6Q5VYS8 1495 aaKnown RBP27.48■■□□□ 1.99
CMBL-201ENST00000296658 ABCC9O60706 1549 aa27.22■■□□□ 1.95
CMBL-201ENST00000296658 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
CMBL-201ENST00000296658 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
CMBL-201ENST00000296658 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
CMBL-201ENST00000296658 NACADO15069 1562 aa26.79■■□□□ 1.88
CMBL-201ENST00000296658 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
CMBL-201ENST00000296658 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
CMBL-201ENST00000296658 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
CMBL-201ENST00000296658 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
CMBL-201ENST00000296658 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
CMBL-201ENST00000296658 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
CMBL-201ENST00000296658 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
CMBL-201ENST00000296658 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
CMBL-201ENST00000296658 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
CMBL-201ENST00000296658 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
CMBL-201ENST00000296658 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
CMBL-201ENST00000296658 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
CMBL-201ENST00000296658 WIZO95785 1651 aa25.04■■□□□ 1.6
CMBL-201ENST00000296658 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
CMBL-201ENST00000296658 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
CMBL-201ENST00000296658 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
CMBL-201ENST00000296658 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CMBL-201ENST00000296658 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
CMBL-201ENST00000296658 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
CMBL-201ENST00000296658 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
CMBL-201ENST00000296658 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
CMBL-201ENST00000296658 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
CMBL-201ENST00000296658 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
CMBL-201ENST00000296658 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CMBL-201ENST00000296658 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
CMBL-201ENST00000296658 HRCP23327 699 aa24.17■■□□□ 1.46
CMBL-201ENST00000296658 CFTRP13569 1480 aa24.09■■□□□ 1.45
CMBL-201ENST00000296658 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
CMBL-201ENST00000296658 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
CMBL-201ENST00000296658 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
CMBL-201ENST00000296658 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
CMBL-201ENST00000296658 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CMBL-201ENST00000296658 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
CMBL-201ENST00000296658 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
CMBL-201ENST00000296658 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
CMBL-201ENST00000296658 NESP48681 1621 aa23.83■■□□□ 1.41
CMBL-201ENST00000296658 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
CMBL-201ENST00000296658 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
CMBL-201ENST00000296658 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
CMBL-201ENST00000296658 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
CMBL-201ENST00000296658 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
CMBL-201ENST00000296658 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
CMBL-201ENST00000296658 CUX1P39880 1505 aa23.65■■□□□ 1.38
CMBL-201ENST00000296658 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
CMBL-201ENST00000296658 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
CMBL-201ENST00000296658 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
CMBL-201ENST00000296658 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
CMBL-201ENST00000296658 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
CMBL-201ENST00000296658 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
CMBL-201ENST00000296658 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
CMBL-201ENST00000296658 EEA1Q15075 1411 aa23.44■■□□□ 1.34
CMBL-201ENST00000296658 SOGA1O94964 1423 aa23.44■■□□□ 1.34
CMBL-201ENST00000296658 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
CMBL-201ENST00000296658 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
CMBL-201ENST00000296658 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
CMBL-201ENST00000296658 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
CMBL-201ENST00000296658 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
CMBL-201ENST00000296658 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
CMBL-201ENST00000296658 WDR62O43379 1518 aa23.3■■□□□ 1.32
CMBL-201ENST00000296658 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CMBL-201ENST00000296658 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
CMBL-201ENST00000296658 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
CMBL-201ENST00000296658 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
CMBL-201ENST00000296658 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
CMBL-201ENST00000296658 CUX2O14529 1486 aa23.22■■□□□ 1.31
CMBL-201ENST00000296658 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
CMBL-201ENST00000296658 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
CMBL-201ENST00000296658 KIF21BO75037 1637 aa23.12■■□□□ 1.29
CMBL-201ENST00000296658 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
CMBL-201ENST00000296658 IGF1RP08069 1367 aa23.08■■□□□ 1.29
CMBL-201ENST00000296658 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
CMBL-201ENST00000296658 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
CMBL-201ENST00000296658 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
CMBL-201ENST00000296658 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
CMBL-201ENST00000296658 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
CMBL-201ENST00000296658 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
CMBL-201ENST00000296658 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
CMBL-201ENST00000296658 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
CMBL-201ENST00000296658 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
CMBL-201ENST00000296658 CARMIL1Q5VZK9 1371 aa22.96■■□□□ 1.27
CMBL-201ENST00000296658 CUL7Q14999 1698 aa22.94■■□□□ 1.26
CMBL-201ENST00000296658 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
CMBL-201ENST00000296658 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.265e-8■■■□□ 19.1
CMBL-201ENST00000296658 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
CMBL-201ENST00000296658 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
CMBL-201ENST00000296658 GRIN2BQ13224 1484 aa22.88■■□□□ 1.25
CMBL-201ENST00000296658 EIF4G3O43432 1585 aaKnown RBP22.86■■□□□ 1.25
CMBL-201ENST00000296658 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
CMBL-201ENST00000296658 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
CMBL-201ENST00000296658 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
CMBL-201ENST00000296658 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
CMBL-201ENST00000296658 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms