RNA–Protein interactions for RNA: ENST00000451104.6

PITRM1-206, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2 BASIC

Gene PITRM1, Length 3,183 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-206ENST00000451104 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
PITRM1-206ENST00000451104 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
PITRM1-206ENST00000451104 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
PITRM1-206ENST00000451104 HRCP23327 699 aa24.2■■□□□ 1.47
PITRM1-206ENST00000451104 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
PITRM1-206ENST00000451104 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
PITRM1-206ENST00000451104 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
PITRM1-206ENST00000451104 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
PITRM1-206ENST00000451104 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
PITRM1-206ENST00000451104 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
PITRM1-206ENST00000451104 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
PITRM1-206ENST00000451104 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
PITRM1-206ENST00000451104 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
PITRM1-206ENST00000451104 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
PITRM1-206ENST00000451104 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PITRM1-206ENST00000451104 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
PITRM1-206ENST00000451104 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.24
PITRM1-206ENST00000451104 ZEB1P37275 1124 aaPredicted RBP22.77■■□□□ 1.23
PITRM1-206ENST00000451104 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.21
PITRM1-206ENST00000451104 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
PITRM1-206ENST00000451104 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
PITRM1-206ENST00000451104 NACADO15069 1562 aa22.32■■□□□ 1.16
PITRM1-206ENST00000451104 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
PITRM1-206ENST00000451104 ACIN1Q9UKV3 1341 aaKnown RBP22.29■■□□□ 1.16
PITRM1-206ENST00000451104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
PITRM1-206ENST00000451104 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
PITRM1-206ENST00000451104 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
PITRM1-206ENST00000451104 CCER1Q8TC90 406 aaPredicted RBP22.17■■□□□ 1.14
PITRM1-206ENST00000451104 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
PITRM1-206ENST00000451104 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
PITRM1-206ENST00000451104 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
PITRM1-206ENST00000451104 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
PITRM1-206ENST00000451104 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
PITRM1-206ENST00000451104 MYT1Q01538 1121 aa21.85■■□□□ 1.09
PITRM1-206ENST00000451104 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
PITRM1-206ENST00000451104 YTHDC1Q96MU7 727 aaKnown RBP21.8■■□□□ 1.08
PITRM1-206ENST00000451104 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
PITRM1-206ENST00000451104 ZNF316A6NFI3 1004 aaPredicted RBP21.66■■□□□ 1.06
PITRM1-206ENST00000451104 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
PITRM1-206ENST00000451104 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
PITRM1-206ENST00000451104 MIER1Q8N108 512 aa21.55■■□□□ 1.04
PITRM1-206ENST00000451104 WIZO95785 1651 aa21.54■■□□□ 1.04
PITRM1-206ENST00000451104 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
PITRM1-206ENST00000451104 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
PITRM1-206ENST00000451104 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
PITRM1-206ENST00000451104 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
PITRM1-206ENST00000451104 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
PITRM1-206ENST00000451104 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
PITRM1-206ENST00000451104 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
PITRM1-206ENST00000451104 SOGA1O94964 1423 aa21.37■■□□□ 1.01
PITRM1-206ENST00000451104 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
PITRM1-206ENST00000451104 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
PITRM1-206ENST00000451104 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
PITRM1-206ENST00000451104 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
PITRM1-206ENST00000451104 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
PITRM1-206ENST00000451104 SUPT16HQ9Y5B9 1047 aaKnown RBP21.11■□□□□ 0.97
PITRM1-206ENST00000451104 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
PITRM1-206ENST00000451104 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
PITRM1-206ENST00000451104 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
PITRM1-206ENST00000451104 EEA1Q15075 1411 aa21.06■□□□□ 0.96
PITRM1-206ENST00000451104 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
PITRM1-206ENST00000451104 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
PITRM1-206ENST00000451104 APLP2Q06481 763 aa20.99■□□□□ 0.95
PITRM1-206ENST00000451104 CLIP1P30622 1438 aa20.97■□□□□ 0.95
PITRM1-206ENST00000451104 TSHZ2Q9NRE2 1034 aa20.96■□□□□ 0.95
PITRM1-206ENST00000451104 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
PITRM1-206ENST00000451104 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
PITRM1-206ENST00000451104 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
PITRM1-206ENST00000451104 ANP32EQ9BTT0 268 aa20.86■□□□□ 0.93
PITRM1-206ENST00000451104 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
PITRM1-206ENST00000451104 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
PITRM1-206ENST00000451104 BCANQ96GW7 911 aa20.81■□□□□ 0.92
PITRM1-206ENST00000451104 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
PITRM1-206ENST00000451104 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
PITRM1-206ENST00000451104 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
PITRM1-206ENST00000451104 KIF21BO75037 1637 aa20.74■□□□□ 0.91
PITRM1-206ENST00000451104 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
PITRM1-206ENST00000451104 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
PITRM1-206ENST00000451104 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
PITRM1-206ENST00000451104 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
PITRM1-206ENST00000451104 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
PITRM1-206ENST00000451104 NCAPD3P42695 1498 aa20.66■□□□□ 0.9
PITRM1-206ENST00000451104 ITGAEP38570 1179 aa20.65■□□□□ 0.9
PITRM1-206ENST00000451104 FKBP8Q14318 412 aa20.65■□□□□ 0.9
PITRM1-206ENST00000451104 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
PITRM1-206ENST00000451104 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
PITRM1-206ENST00000451104 HMGXB3Q12766 1538 aa20.52■□□□□ 0.88
PITRM1-206ENST00000451104 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
PITRM1-206ENST00000451104 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
PITRM1-206ENST00000451104 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
PITRM1-206ENST00000451104 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
PITRM1-206ENST00000451104 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
PITRM1-206ENST00000451104 NEFLP07196 543 aa20.43■□□□□ 0.86
PITRM1-206ENST00000451104 HIRIP3Q9BW71 556 aaPredicted RBP20.43■□□□□ 0.86
PITRM1-206ENST00000451104 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
PITRM1-206ENST00000451104 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
PITRM1-206ENST00000451104 CUX2O14529 1486 aa20.37■□□□□ 0.85
PITRM1-206ENST00000451104 MAPKBP1O60336 1514 aa20.35■□□□□ 0.85
PITRM1-206ENST00000451104 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
PITRM1-206ENST00000451104 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms