RNA–Protein interactions for RNA: ENST00000433215.6

SPG21-203, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-203ENST00000433215 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.16
SPG21-203ENST00000433215 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
SPG21-203ENST00000433215 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
SPG21-203ENST00000433215 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
SPG21-203ENST00000433215 ABCC9O60706 1549 aa28.66■■■□□ 2.18
SPG21-203ENST00000433215 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
SPG21-203ENST00000433215 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
SPG21-203ENST00000433215 NACADO15069 1562 aa28.3■■■□□ 2.12
SPG21-203ENST00000433215 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
SPG21-203ENST00000433215 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
SPG21-203ENST00000433215 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
SPG21-203ENST00000433215 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
SPG21-203ENST00000433215 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
SPG21-203ENST00000433215 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
SPG21-203ENST00000433215 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
SPG21-203ENST00000433215 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.9
SPG21-203ENST00000433215 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
SPG21-203ENST00000433215 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
SPG21-203ENST00000433215 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
SPG21-203ENST00000433215 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
SPG21-203ENST00000433215 WIZO95785 1651 aa26.55■■□□□ 1.84
SPG21-203ENST00000433215 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
SPG21-203ENST00000433215 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
SPG21-203ENST00000433215 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
SPG21-203ENST00000433215 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
SPG21-203ENST00000433215 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
SPG21-203ENST00000433215 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
SPG21-203ENST00000433215 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
SPG21-203ENST00000433215 HMGXB3Q12766 1538 aa26.08■■□□□ 1.76
SPG21-203ENST00000433215 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
SPG21-203ENST00000433215 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
SPG21-203ENST00000433215 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
SPG21-203ENST00000433215 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
SPG21-203ENST00000433215 CFTRP13569 1480 aa25.51■■□□□ 1.67
SPG21-203ENST00000433215 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
SPG21-203ENST00000433215 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
SPG21-203ENST00000433215 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.65
SPG21-203ENST00000433215 PRDM2Q13029 1718 aa25.33■■□□□ 1.64
SPG21-203ENST00000433215 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
SPG21-203ENST00000433215 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
SPG21-203ENST00000433215 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
SPG21-203ENST00000433215 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
SPG21-203ENST00000433215 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
SPG21-203ENST00000433215 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
SPG21-203ENST00000433215 NESP48681 1621 aa25.12■■□□□ 1.61
SPG21-203ENST00000433215 CUX1P39880 1505 aa25.08■■□□□ 1.61
SPG21-203ENST00000433215 EEA1Q15075 1411 aa25.08■■□□□ 1.6
SPG21-203ENST00000433215 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
SPG21-203ENST00000433215 FAM9AQ8IZU1 332 aaPredicted RBP25.06■■□□□ 1.6
SPG21-203ENST00000433215 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
SPG21-203ENST00000433215 SOGA1O94964 1423 aa24.99■■□□□ 1.59
SPG21-203ENST00000433215 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
SPG21-203ENST00000433215 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
SPG21-203ENST00000433215 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
SPG21-203ENST00000433215 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
SPG21-203ENST00000433215 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
SPG21-203ENST00000433215 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
SPG21-203ENST00000433215 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
SPG21-203ENST00000433215 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
SPG21-203ENST00000433215 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
SPG21-203ENST00000433215 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
SPG21-203ENST00000433215 MRC2Q9UBG0 1479 aa24.71■■□□□ 1.55
SPG21-203ENST00000433215 KIF21BO75037 1637 aa24.68■■□□□ 1.54
SPG21-203ENST00000433215 CUX2O14529 1486 aa24.67■■□□□ 1.54
SPG21-203ENST00000433215 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
SPG21-203ENST00000433215 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
SPG21-203ENST00000433215 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
SPG21-203ENST00000433215 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
SPG21-203ENST00000433215 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
SPG21-203ENST00000433215 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
SPG21-203ENST00000433215 WDR62O43379 1518 aa24.57■■□□□ 1.52
SPG21-203ENST00000433215 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
SPG21-203ENST00000433215 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
SPG21-203ENST00000433215 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
SPG21-203ENST00000433215 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
SPG21-203ENST00000433215 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
SPG21-203ENST00000433215 IGF1RP08069 1367 aa24.5■■□□□ 1.51
SPG21-203ENST00000433215 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
SPG21-203ENST00000433215 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
SPG21-203ENST00000433215 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
SPG21-203ENST00000433215 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
SPG21-203ENST00000433215 ABCA5Q8WWZ7 1642 aa24.42■■□□□ 1.5
SPG21-203ENST00000433215 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
SPG21-203ENST00000433215 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.49
SPG21-203ENST00000433215 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
SPG21-203ENST00000433215 CUL7Q14999 1698 aa24.36■■□□□ 1.49
SPG21-203ENST00000433215 CLIP1P30622 1438 aa24.26■■□□□ 1.47
SPG21-203ENST00000433215 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
SPG21-203ENST00000433215 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
SPG21-203ENST00000433215 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
SPG21-203ENST00000433215 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
SPG21-203ENST00000433215 FHAD1B1AJZ9 1412 aa24.15■■□□□ 1.46
SPG21-203ENST00000433215 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.46
SPG21-203ENST00000433215 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
SPG21-203ENST00000433215 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
SPG21-203ENST00000433215 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
SPG21-203ENST00000433215 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
SPG21-203ENST00000433215 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
SPG21-203ENST00000433215 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
SPG21-203ENST00000433215 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms