RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
POLR1C-201ENST00000304004 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
POLR1C-201ENST00000304004 ABCC9O60706 1549 aa34.44■■■■□ 3.1
POLR1C-201ENST00000304004 CHIC1Q5VXU3 224 aa33.27■■■□□ 2.92
POLR1C-201ENST00000304004 RB1CC1Q8TDY2 1594 aa33.24■■■□□ 2.91
POLR1C-201ENST00000304004 NACADO15069 1562 aa33.17■■■□□ 2.9
POLR1C-201ENST00000304004 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
POLR1C-201ENST00000304004 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
POLR1C-201ENST00000304004 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
POLR1C-201ENST00000304004 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
POLR1C-201ENST00000304004 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
POLR1C-201ENST00000304004 AEBP2Q6ZN18 517 aaPredicted RBP32.64■■■□□ 2.82
POLR1C-201ENST00000304004 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
POLR1C-201ENST00000304004 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
POLR1C-201ENST00000304004 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
POLR1C-201ENST00000304004 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
POLR1C-201ENST00000304004 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
POLR1C-201ENST00000304004 EIF4G1Q04637 1599 aaKnown RBP31.37■■■□□ 2.61
POLR1C-201ENST00000304004 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
POLR1C-201ENST00000304004 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
POLR1C-201ENST00000304004 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
POLR1C-201ENST00000304004 BAZ1AQ9NRL2 1556 aaPredicted RBP30.73■■■□□ 2.51
POLR1C-201ENST00000304004 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
POLR1C-201ENST00000304004 ATAD2BQ9ULI0 1458 aa30.53■■■□□ 2.48
POLR1C-201ENST00000304004 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
POLR1C-201ENST00000304004 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
POLR1C-201ENST00000304004 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
POLR1C-201ENST00000304004 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
POLR1C-201ENST00000304004 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
POLR1C-201ENST00000304004 WIZO95785 1651 aa30.26■■■□□ 2.43
POLR1C-201ENST00000304004 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
POLR1C-201ENST00000304004 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
POLR1C-201ENST00000304004 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
POLR1C-201ENST00000304004 NESP48681 1621 aa29.81■■■□□ 2.36
POLR1C-201ENST00000304004 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
POLR1C-201ENST00000304004 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
POLR1C-201ENST00000304004 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
POLR1C-201ENST00000304004 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
POLR1C-201ENST00000304004 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
POLR1C-201ENST00000304004 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
POLR1C-201ENST00000304004 CUX2O14529 1486 aa29.45■■■□□ 2.31
POLR1C-201ENST00000304004 CFTRP13569 1480 aa29.45■■■□□ 2.31
POLR1C-201ENST00000304004 CCDC88BA6NC98 1476 aa29.44■■■□□ 2.3
POLR1C-201ENST00000304004 PHF23Q9BUL5 403 aaPredicted RBP29.44■■■□□ 2.3
POLR1C-201ENST00000304004 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
POLR1C-201ENST00000304004 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
POLR1C-201ENST00000304004 MRC2Q9UBG0 1479 aa29.27■■■□□ 2.28
POLR1C-201ENST00000304004 WDR62O43379 1518 aa29.23■■■□□ 2.27
POLR1C-201ENST00000304004 SUPT5HO00267 1087 aaKnown RBP29.13■■■□□ 2.25
POLR1C-201ENST00000304004 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
POLR1C-201ENST00000304004 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
POLR1C-201ENST00000304004 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
POLR1C-201ENST00000304004 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
POLR1C-201ENST00000304004 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
POLR1C-201ENST00000304004 CUX1P39880 1505 aa28.64■■■□□ 2.18
POLR1C-201ENST00000304004 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
POLR1C-201ENST00000304004 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
POLR1C-201ENST00000304004 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
POLR1C-201ENST00000304004 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
POLR1C-201ENST00000304004 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
POLR1C-201ENST00000304004 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
POLR1C-201ENST00000304004 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
POLR1C-201ENST00000304004 TOP2BQ02880 1626 aa28.44■■■□□ 2.14
POLR1C-201ENST00000304004 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
POLR1C-201ENST00000304004 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
POLR1C-201ENST00000304004 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
POLR1C-201ENST00000304004 SOGA1O94964 1423 aa28.38■■■□□ 2.13
POLR1C-201ENST00000304004 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
POLR1C-201ENST00000304004 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
POLR1C-201ENST00000304004 CHD1O14646 1710 aa28.29■■■□□ 2.12
POLR1C-201ENST00000304004 AQRO60306 1485 aaKnown RBP eCLIP28.29■■■□□ 2.124e-6■□□□□ 10.8
POLR1C-201ENST00000304004 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
POLR1C-201ENST00000304004 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
POLR1C-201ENST00000304004 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
POLR1C-201ENST00000304004 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
POLR1C-201ENST00000304004 GAPVD1Q14C86 1478 aa28.13■■■□□ 2.09
POLR1C-201ENST00000304004 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
POLR1C-201ENST00000304004 MAGI1Q96QZ7 1491 aaPredicted RBP28.11■■■□□ 2.09
POLR1C-201ENST00000304004 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
POLR1C-201ENST00000304004 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
POLR1C-201ENST00000304004 SYNJ2O15056 1496 aa27.97■■■□□ 2.07
POLR1C-201ENST00000304004 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
POLR1C-201ENST00000304004 FBLN2P98095 1184 aa27.87■■■□□ 2.05
POLR1C-201ENST00000304004 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
POLR1C-201ENST00000304004 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
POLR1C-201ENST00000304004 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
POLR1C-201ENST00000304004 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
POLR1C-201ENST00000304004 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
POLR1C-201ENST00000304004 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
POLR1C-201ENST00000304004 CUL7Q14999 1698 aa27.8■■■□□ 2.04
POLR1C-201ENST00000304004 FHAD1B1AJZ9 1412 aa27.78■■■□□ 2.04
POLR1C-201ENST00000304004 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
POLR1C-201ENST00000304004 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
POLR1C-201ENST00000304004 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
POLR1C-201ENST00000304004 NUP160Q12769 1436 aa27.66■■■□□ 2.02
POLR1C-201ENST00000304004 PLPPR3Q6T4P5 718 aa27.61■■■□□ 2.01
POLR1C-201ENST00000304004 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
POLR1C-201ENST00000304004 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
POLR1C-201ENST00000304004 IGF1RP08069 1367 aa27.59■■■□□ 2.01
POLR1C-201ENST00000304004 ARAP1Q96P48 1450 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms