RNA–Protein interactions for RNA: ENST00000409552.4

CLEC16A-202, Transcript of C-type lectin domain containing 16A, humanhuman

TSL 1 (best) BASIC

Gene CLEC16A, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC16A-202ENST00000409552 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
CLEC16A-202ENST00000409552 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
CLEC16A-202ENST00000409552 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
CLEC16A-202ENST00000409552 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
CLEC16A-202ENST00000409552 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
CLEC16A-202ENST00000409552 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
CLEC16A-202ENST00000409552 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
CLEC16A-202ENST00000409552 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
CLEC16A-202ENST00000409552 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
CLEC16A-202ENST00000409552 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
CLEC16A-202ENST00000409552 HRCP23327 699 aa24.2■■□□□ 1.47
CLEC16A-202ENST00000409552 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
CLEC16A-202ENST00000409552 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
CLEC16A-202ENST00000409552 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
CLEC16A-202ENST00000409552 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
CLEC16A-202ENST00000409552 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
CLEC16A-202ENST00000409552 ABCC9O60706 1549 aa23.68■■□□□ 1.38
CLEC16A-202ENST00000409552 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
CLEC16A-202ENST00000409552 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
CLEC16A-202ENST00000409552 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
CLEC16A-202ENST00000409552 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
CLEC16A-202ENST00000409552 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
CLEC16A-202ENST00000409552 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
CLEC16A-202ENST00000409552 WIZO95785 1651 aa23.12■■□□□ 1.29
CLEC16A-202ENST00000409552 NACADO15069 1562 aa23.02■■□□□ 1.28
CLEC16A-202ENST00000409552 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
CLEC16A-202ENST00000409552 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.25
CLEC16A-202ENST00000409552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
CLEC16A-202ENST00000409552 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
CLEC16A-202ENST00000409552 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
CLEC16A-202ENST00000409552 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
CLEC16A-202ENST00000409552 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
CLEC16A-202ENST00000409552 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
CLEC16A-202ENST00000409552 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
CLEC16A-202ENST00000409552 SOGA1O94964 1423 aa22.6■■□□□ 1.21
CLEC16A-202ENST00000409552 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
CLEC16A-202ENST00000409552 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
CLEC16A-202ENST00000409552 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
CLEC16A-202ENST00000409552 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
CLEC16A-202ENST00000409552 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
CLEC16A-202ENST00000409552 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
CLEC16A-202ENST00000409552 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
CLEC16A-202ENST00000409552 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
CLEC16A-202ENST00000409552 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
CLEC16A-202ENST00000409552 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
CLEC16A-202ENST00000409552 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
CLEC16A-202ENST00000409552 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
CLEC16A-202ENST00000409552 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
CLEC16A-202ENST00000409552 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
CLEC16A-202ENST00000409552 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
CLEC16A-202ENST00000409552 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
CLEC16A-202ENST00000409552 ACIN1Q9UKV3 1341 aaKnown RBP22.16■■□□□ 1.14
CLEC16A-202ENST00000409552 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
CLEC16A-202ENST00000409552 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
CLEC16A-202ENST00000409552 EEA1Q15075 1411 aa22.09■■□□□ 1.13
CLEC16A-202ENST00000409552 GTF3C3Q9Y5Q9 886 aa22.05■■□□□ 1.12
CLEC16A-202ENST00000409552 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
CLEC16A-202ENST00000409552 CLIP1P30622 1438 aa22■■□□□ 1.11
CLEC16A-202ENST00000409552 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
CLEC16A-202ENST00000409552 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
CLEC16A-202ENST00000409552 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
CLEC16A-202ENST00000409552 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
CLEC16A-202ENST00000409552 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
CLEC16A-202ENST00000409552 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
CLEC16A-202ENST00000409552 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
CLEC16A-202ENST00000409552 APLP2Q06481 763 aa21.9■■□□□ 1.1
CLEC16A-202ENST00000409552 MIER1Q8N108 512 aa21.86■■□□□ 1.09
CLEC16A-202ENST00000409552 KIF21BO75037 1637 aa21.85■■□□□ 1.09
CLEC16A-202ENST00000409552 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
CLEC16A-202ENST00000409552 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
CLEC16A-202ENST00000409552 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
CLEC16A-202ENST00000409552 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
CLEC16A-202ENST00000409552 ITGAEP38570 1179 aa21.65■■□□□ 1.06
CLEC16A-202ENST00000409552 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
CLEC16A-202ENST00000409552 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
CLEC16A-202ENST00000409552 CUX1P39880 1505 aa21.55■■□□□ 1.04
CLEC16A-202ENST00000409552 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
CLEC16A-202ENST00000409552 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
CLEC16A-202ENST00000409552 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
CLEC16A-202ENST00000409552 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
CLEC16A-202ENST00000409552 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
CLEC16A-202ENST00000409552 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
CLEC16A-202ENST00000409552 P3H3Q8IVL6 736 aa21.39■■□□□ 1.01
CLEC16A-202ENST00000409552 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
CLEC16A-202ENST00000409552 CFTRP13569 1480 aa21.33■■□□□ 1.01
CLEC16A-202ENST00000409552 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1.01
CLEC16A-202ENST00000409552 RRBP1Q9P2E9 1410 aaKnown RBP21.32■■□□□ 1
CLEC16A-202ENST00000409552 CUX2O14529 1486 aa21.31■■□□□ 1
CLEC16A-202ENST00000409552 HMGXB3Q12766 1538 aa21.31■■□□□ 1
CLEC16A-202ENST00000409552 KCNH8Q96L42 1107 aa21.3■■□□□ 1
CLEC16A-202ENST00000409552 IGF1RP08069 1367 aa21.28■■□□□ 1
CLEC16A-202ENST00000409552 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
CLEC16A-202ENST00000409552 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
CLEC16A-202ENST00000409552 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
CLEC16A-202ENST00000409552 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
CLEC16A-202ENST00000409552 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
CLEC16A-202ENST00000409552 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
CLEC16A-202ENST00000409552 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
CLEC16A-202ENST00000409552 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
CLEC16A-202ENST00000409552 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms