RNA–Protein interactions for RNA: ENST00000371097.8

LCOR-203, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LCOR, Length 4,852 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-203ENST00000371097 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
LCOR-203ENST00000371097 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
LCOR-203ENST00000371097 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
LCOR-203ENST00000371097 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
LCOR-203ENST00000371097 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
LCOR-203ENST00000371097 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
LCOR-203ENST00000371097 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
LCOR-203ENST00000371097 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
LCOR-203ENST00000371097 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
LCOR-203ENST00000371097 HRCP23327 699 aa21.47■■□□□ 1.03
LCOR-203ENST00000371097 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
LCOR-203ENST00000371097 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
LCOR-203ENST00000371097 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
LCOR-203ENST00000371097 CCER1Q8TC90 406 aaPredicted RBP21.34■■□□□ 1.01
LCOR-203ENST00000371097 APLP2Q06481 763 aa21.34■■□□□ 1.01
LCOR-203ENST00000371097 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
LCOR-203ENST00000371097 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
LCOR-203ENST00000371097 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
LCOR-203ENST00000371097 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.97
LCOR-203ENST00000371097 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
LCOR-203ENST00000371097 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
LCOR-203ENST00000371097 YTHDC1Q96MU7 727 aaKnown RBP20.99■□□□□ 0.95
LCOR-203ENST00000371097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
LCOR-203ENST00000371097 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
LCOR-203ENST00000371097 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
LCOR-203ENST00000371097 ITGAEP38570 1179 aa20.46■□□□□ 0.87
LCOR-203ENST00000371097 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
LCOR-203ENST00000371097 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
LCOR-203ENST00000371097 NEFLP07196 543 aa20.34■□□□□ 0.85
LCOR-203ENST00000371097 GTF3C3Q9Y5Q9 886 aa20.24■□□□□ 0.83
LCOR-203ENST00000371097 MYT1Q01538 1121 aa20.24■□□□□ 0.83
LCOR-203ENST00000371097 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
LCOR-203ENST00000371097 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
LCOR-203ENST00000371097 ABCC9O60706 1549 aa20.15■□□□□ 0.82
LCOR-203ENST00000371097 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
LCOR-203ENST00000371097 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
LCOR-203ENST00000371097 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
LCOR-203ENST00000371097 ZNF316A6NFI3 1004 aaPredicted RBP19.98■□□□□ 0.79
LCOR-203ENST00000371097 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
LCOR-203ENST00000371097 POLR3GLQ9BT43 218 aa19.92■□□□□ 0.78
LCOR-203ENST00000371097 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
LCOR-203ENST00000371097 BCANQ96GW7 911 aa19.88■□□□□ 0.77
LCOR-203ENST00000371097 FAM50AQ14320 339 aaKnown RBP19.87■□□□□ 0.77
LCOR-203ENST00000371097 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
LCOR-203ENST00000371097 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
LCOR-203ENST00000371097 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
LCOR-203ENST00000371097 P3H3Q8IVL6 736 aa19.58■□□□□ 0.73
LCOR-203ENST00000371097 TRIM52Q96A61 297 aa19.57■□□□□ 0.72
LCOR-203ENST00000371097 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
LCOR-203ENST00000371097 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
LCOR-203ENST00000371097 ANP32CO43423 234 aa19.55■□□□□ 0.72
LCOR-203ENST00000371097 MIER1Q8N108 512 aa19.52■□□□□ 0.72
LCOR-203ENST00000371097 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
LCOR-203ENST00000371097 DAXXQ9UER7 740 aaPredicted RBP19.4■□□□□ 0.7
LCOR-203ENST00000371097 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
LCOR-203ENST00000371097 FKBP8Q14318 412 aa19.38■□□□□ 0.69
LCOR-203ENST00000371097 ARID3CA6NKF2 412 aa19.37■□□□□ 0.69
LCOR-203ENST00000371097 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
LCOR-203ENST00000371097 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
LCOR-203ENST00000371097 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
LCOR-203ENST00000371097 RTL5Q5HYW3 569 aaPredicted RBP19.3■□□□□ 0.68
LCOR-203ENST00000371097 CLIP1P30622 1438 aa19.28■□□□□ 0.68
LCOR-203ENST00000371097 HIRIP3Q9BW71 556 aaPredicted RBP19.26■□□□□ 0.67
LCOR-203ENST00000371097 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
LCOR-203ENST00000371097 TONSLQ96HA7 1378 aa19.18■□□□□ 0.66
LCOR-203ENST00000371097 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
LCOR-203ENST00000371097 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
LCOR-203ENST00000371097 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
LCOR-203ENST00000371097 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
LCOR-203ENST00000371097 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
LCOR-203ENST00000371097 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
LCOR-203ENST00000371097 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
LCOR-203ENST00000371097 FBLN2P98095 1184 aa19.09■□□□□ 0.65
LCOR-203ENST00000371097 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
LCOR-203ENST00000371097 IRX6P78412 446 aaPredicted RBP19.07■□□□□ 0.64
LCOR-203ENST00000371097 EEA1Q15075 1411 aa19.06■□□□□ 0.64
LCOR-203ENST00000371097 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
LCOR-203ENST00000371097 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
LCOR-203ENST00000371097 SOGA1O94964 1423 aa19.04■□□□□ 0.64
LCOR-203ENST00000371097 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
LCOR-203ENST00000371097 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
LCOR-203ENST00000371097 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
LCOR-203ENST00000371097 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
LCOR-203ENST00000371097 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
LCOR-203ENST00000371097 MRS2Q9HD23 443 aa18.91■□□□□ 0.62
LCOR-203ENST00000371097 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
LCOR-203ENST00000371097 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
LCOR-203ENST00000371097 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
LCOR-203ENST00000371097 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
LCOR-203ENST00000371097 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
LCOR-203ENST00000371097 RRP7BPQ9NSQ0 103 aa18.87■□□□□ 0.61
LCOR-203ENST00000371097 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
LCOR-203ENST00000371097 NACADO15069 1562 aa18.85■□□□□ 0.61
LCOR-203ENST00000371097 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
LCOR-203ENST00000371097 NBR1Q14596 966 aa18.83■□□□□ 0.6
LCOR-203ENST00000371097 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
LCOR-203ENST00000371097 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
LCOR-203ENST00000371097 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
LCOR-203ENST00000371097 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.59
LCOR-203ENST00000371097 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms