Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 DUSP8P5-201ENST00000422884 1815 ntBASIC23.02■■□□□ 1.28
NAF1Q96HR8 WHAMMP3-201ENST00000611636 1609 ntBASIC23.01■■□□□ 1.27
NAF1Q96HR8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.01■■□□□ 1.27
NAF1Q96HR8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NAF1Q96HR8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NAF1Q96HR8 LONRF2P2-201ENST00000439212 571 ntBASIC23.01■■□□□ 1.27
NAF1Q96HR8 TSPY9P-201ENST00000440215 945 ntBASIC23.01■■□□□ 1.27
NAF1Q96HR8 TSPY11P-201ENST00000442607 1045 ntBASIC23.01■■□□□ 1.27
NAF1Q96HR8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.01■■□□□ 1.27
NAF1Q96HR8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NAF1Q96HR8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NAF1Q96HR8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NAF1Q96HR8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
NAF1Q96HR8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
NAF1Q96HR8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23■■□□□ 1.27
NAF1Q96HR8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23■■□□□ 1.27
NAF1Q96HR8 MIR638-201ENST00000385237 100 ntBASIC23■■□□□ 1.27
NAF1Q96HR8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NAF1Q96HR8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23■■□□□ 1.27
NAF1Q96HR8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NAF1Q96HR8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NAF1Q96HR8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23■■□□□ 1.27
NAF1Q96HR8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
NAF1Q96HR8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NAF1Q96HR8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NAF1Q96HR8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.98■■□□□ 1.27
NAF1Q96HR8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NAF1Q96HR8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NAF1Q96HR8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NAF1Q96HR8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NAF1Q96HR8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NAF1Q96HR8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.98■■□□□ 1.27
NAF1Q96HR8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NAF1Q96HR8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NAF1Q96HR8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
NAF1Q96HR8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.97■■□□□ 1.27
NAF1Q96HR8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NAF1Q96HR8 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.97■■□□□ 1.27
NAF1Q96HR8 LINC01124-201ENST00000409786 2117 ntBASIC22.97■■□□□ 1.27
NAF1Q96HR8 AL024507.2-201ENST00000606070 2574 ntBASIC22.96■■□□□ 1.27
NAF1Q96HR8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
NAF1Q96HR8 AC010501.1-201ENST00000606270 1962 ntBASIC22.96■■□□□ 1.27
NAF1Q96HR8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NAF1Q96HR8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NAF1Q96HR8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NAF1Q96HR8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NAF1Q96HR8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.96■■□□□ 1.27
NAF1Q96HR8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NAF1Q96HR8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
NAF1Q96HR8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.95■■□□□ 1.26
NAF1Q96HR8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NAF1Q96HR8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.95■■□□□ 1.26
NAF1Q96HR8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.95■■□□□ 1.26
NAF1Q96HR8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.95■■□□□ 1.26
NAF1Q96HR8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
NAF1Q96HR8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
NAF1Q96HR8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NAF1Q96HR8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NAF1Q96HR8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.93■■□□□ 1.26
NAF1Q96HR8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.93■■□□□ 1.26
NAF1Q96HR8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.93■■□□□ 1.26
NAF1Q96HR8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NAF1Q96HR8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.93■■□□□ 1.26
NAF1Q96HR8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NAF1Q96HR8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NAF1Q96HR8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
NAF1Q96HR8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.92■■□□□ 1.26
NAF1Q96HR8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NAF1Q96HR8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NAF1Q96HR8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms