RNA–Protein interactions for RNA: ENST00000298943.3

C1QL3-201, Transcript of complement C1q like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1QL3, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QL3-201ENST00000298943 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
C1QL3-201ENST00000298943 SHROOM4Q9ULL8 1493 aa39.32■■■■□ 3.89
C1QL3-201ENST00000298943 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
C1QL3-201ENST00000298943 ZCCHC6Q5VYS8 1495 aaKnown RBP38.98■■■■□ 3.83
C1QL3-201ENST00000298943 SUPT5HO00267 1087 aaKnown RBP38.56■■■■□ 3.76
C1QL3-201ENST00000298943 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
C1QL3-201ENST00000298943 DCAF1Q9Y4B6 1507 aa37.79■■■■□ 3.64
C1QL3-201ENST00000298943 CHIC1Q5VXU3 224 aa37.49■■■■□ 3.59
C1QL3-201ENST00000298943 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
C1QL3-201ENST00000298943 ABCC9O60706 1549 aa36.77■■■■□ 3.48
C1QL3-201ENST00000298943 SCRIBQ14160 1630 aa36.73■■■■□ 3.47
C1QL3-201ENST00000298943 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
C1QL3-201ENST00000298943 LOC105371045A0A1W2PR82 267 aa36.4■■■■□ 3.42
C1QL3-201ENST00000298943 HRCP23327 699 aa36.33■■■■□ 3.41
C1QL3-201ENST00000298943 PCGF6Q9BYE7 350 aa36.33■■■■□ 3.41
C1QL3-201ENST00000298943 NACADO15069 1562 aa36.21■■■■□ 3.39
C1QL3-201ENST00000298943 RB1CC1Q8TDY2 1594 aa36.09■■■■□ 3.37
C1QL3-201ENST00000298943 CECR2Q9BXF3 1484 aa35.97■■■■□ 3.35
C1QL3-201ENST00000298943 TRIM41Q8WV44 630 aa35.91■■■■□ 3.34
C1QL3-201ENST00000298943 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
C1QL3-201ENST00000298943 WIZO95785 1651 aa35.64■■■■□ 3.3
C1QL3-201ENST00000298943 TRIM26Q12899 539 aaPredicted RBP35.64■■■■□ 3.3
C1QL3-201ENST00000298943 FAM9AQ8IZU1 332 aaPredicted RBP35.63■■■■□ 3.29
C1QL3-201ENST00000298943 PPARGC1BQ86YN6 1023 aaKnown RBP35.6■■■■□ 3.29
C1QL3-201ENST00000298943 BAZ1AQ9NRL2 1556 aaPredicted RBP35.41■■■■□ 3.26
C1QL3-201ENST00000298943 EHMT2Q96KQ7 1210 aa35.34■■■■□ 3.25
C1QL3-201ENST00000298943 EIF4G1Q04637 1599 aaKnown RBP35.16■■■■□ 3.22
C1QL3-201ENST00000298943 SMARCA4P51532 1647 aa35.09■■■■□ 3.21
C1QL3-201ENST00000298943 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
C1QL3-201ENST00000298943 TOP2AP11388 1531 aaKnown RBP35.08■■■■□ 3.21
C1QL3-201ENST00000298943 CCDC88BA6NC98 1476 aa34.95■■■■□ 3.19
C1QL3-201ENST00000298943 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
C1QL3-201ENST00000298943 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
C1QL3-201ENST00000298943 ZEB1P37275 1124 aaPredicted RBP34.84■■■■□ 3.17
C1QL3-201ENST00000298943 PABPN1Q86U42 306 aaKnown RBP eCLIP34.75■■■■□ 3.15
C1QL3-201ENST00000298943 BICRAQ9NZM4 1560 aa34.67■■■■□ 3.14
C1QL3-201ENST00000298943 SOGA1O94964 1423 aa34.54■■■■□ 3.12
C1QL3-201ENST00000298943 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
C1QL3-201ENST00000298943 CEP162Q5TB80 1403 aa34.38■■■■□ 3.09
C1QL3-201ENST00000298943 RUSC2Q8N2Y8 1516 aa34.37■■■■□ 3.09
C1QL3-201ENST00000298943 CSRNP3Q8WYN3 585 aa34.35■■■■□ 3.09
C1QL3-201ENST00000298943 EEA1Q15075 1411 aa34.33■■■■□ 3.09
C1QL3-201ENST00000298943 TNIKQ9UKE5 1360 aa34.32■■■■□ 3.08
C1QL3-201ENST00000298943 WRNQ14191 1432 aaPredicted RBP eCLIP34.32■■■■□ 3.08
C1QL3-201ENST00000298943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.23■■■■□ 3.07
C1QL3-201ENST00000298943 UBTFP17480 764 aaKnown RBP34.22■■■■□ 3.07
C1QL3-201ENST00000298943 TTBK1Q5TCY1 1321 aaPredicted RBP34.21■■■■□ 3.07
C1QL3-201ENST00000298943 ATAD2BQ9ULI0 1458 aa34.2■■■■□ 3.07
C1QL3-201ENST00000298943 CCER1Q8TC90 406 aaPredicted RBP34.13■■■■□ 3.05
C1QL3-201ENST00000298943 GOLGA3Q08378 1498 aa34.12■■■■□ 3.05
C1QL3-201ENST00000298943 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
C1QL3-201ENST00000298943 SYNJ1O43426 1573 aa34.1■■■■□ 3.05
C1QL3-201ENST00000298943 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
C1QL3-201ENST00000298943 KIF21BO75037 1637 aa33.87■■■■□ 3.01
C1QL3-201ENST00000298943 CLIP1P30622 1438 aa33.74■■■□□ 2.99
C1QL3-201ENST00000298943 RAPGEF2Q9Y4G8 1499 aa33.7■■■□□ 2.98
C1QL3-201ENST00000298943 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
C1QL3-201ENST00000298943 VPS8Q8N3P4 1428 aa33.59■■■□□ 2.97
C1QL3-201ENST00000298943 RANGAP1P46060 587 aaPredicted RBP33.55■■■□□ 2.96
C1QL3-201ENST00000298943 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
C1QL3-201ENST00000298943 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
C1QL3-201ENST00000298943 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
C1QL3-201ENST00000298943 SCAF1Q9H7N4 1312 aaKnown RBP33.47■■■□□ 2.95
C1QL3-201ENST00000298943 HNRNPUL2Q1KMD3 747 aaKnown RBP33.46■■■□□ 2.95
C1QL3-201ENST00000298943 DIEXFQ68CQ4 756 aaKnown RBP33.45■■■□□ 2.95
C1QL3-201ENST00000298943 APLP2Q06481 763 aa33.44■■■□□ 2.94
C1QL3-201ENST00000298943 CUX1P39880 1505 aa33.36■■■□□ 2.93
C1QL3-201ENST00000298943 PRXQ9BXM0 1461 aa33.35■■■□□ 2.93
C1QL3-201ENST00000298943 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
C1QL3-201ENST00000298943 CFTRP13569 1480 aa33.26■■■□□ 2.92
C1QL3-201ENST00000298943 ZNF316A6NFI3 1004 aaPredicted RBP33.22■■■□□ 2.91
C1QL3-201ENST00000298943 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
C1QL3-201ENST00000298943 ARAP1Q96P48 1450 aa33.2■■■□□ 2.91
C1QL3-201ENST00000298943 ACIN1Q9UKV3 1341 aaKnown RBP33.17■■■□□ 2.9
C1QL3-201ENST00000298943 NEUROD1Q13562 356 aa33.13■■■□□ 2.89
C1QL3-201ENST00000298943 KANK4Q5T7N3 995 aaPredicted RBP33.04■■■□□ 2.88
C1QL3-201ENST00000298943 CENPBP07199 599 aaPredicted RBP32.97■■■□□ 2.87
C1QL3-201ENST00000298943 PRDM2Q13029 1718 aa32.95■■■□□ 2.86
C1QL3-201ENST00000298943 ARHGAP35Q9NRY4 1499 aa32.91■■■□□ 2.86
C1QL3-201ENST00000298943 CUX2O14529 1486 aa32.9■■■□□ 2.86
C1QL3-201ENST00000298943 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
C1QL3-201ENST00000298943 IGF1RP08069 1367 aa32.86■■■□□ 2.85
C1QL3-201ENST00000298943 RRBP1Q9P2E9 1410 aaKnown RBP32.8■■■□□ 2.84
C1QL3-201ENST00000298943 DHX57Q6P158 1386 aaKnown RBP32.8■■■□□ 2.84
C1QL3-201ENST00000298943 GTF3C3Q9Y5Q9 886 aa32.78■■■□□ 2.84
C1QL3-201ENST00000298943 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
C1QL3-201ENST00000298943 MIER1Q8N108 512 aa32.75■■■□□ 2.83
C1QL3-201ENST00000298943 CLSPNQ9HAW4 1339 aa32.74■■■□□ 2.83
C1QL3-201ENST00000298943 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
C1QL3-201ENST00000298943 CCNB3Q8WWL7 1395 aa32.68■■■□□ 2.82
C1QL3-201ENST00000298943 YTHDC1Q96MU7 727 aaKnown RBP32.68■■■□□ 2.82
C1QL3-201ENST00000298943 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
C1QL3-201ENST00000298943 PELP1Q8IZL8 1130 aaKnown RBP32.67■■■□□ 2.82
C1QL3-201ENST00000298943 ITGAEP38570 1179 aa32.58■■■□□ 2.81
C1QL3-201ENST00000298943 FANCD2Q9BXW9 1451 aa32.58■■■□□ 2.81
C1QL3-201ENST00000298943 TIAM1Q13009 1591 aa32.54■■■□□ 2.8
C1QL3-201ENST00000298943 MAP3K1Q13233 1512 aa32.5■■■□□ 2.79
C1QL3-201ENST00000298943 RAD54L2Q9Y4B4 1467 aa32.45■■■□□ 2.79
C1QL3-201ENST00000298943 P3H3Q8IVL6 736 aa32.44■■■□□ 2.78
C1QL3-201ENST00000298943 LRRC9Q6ZRR7 1453 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms