RNA–Protein interactions for RNA: ENST00000553030.5

BEST2-204, Transcript of bestrophin 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST2, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2-204ENST00000553030 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
BEST2-204ENST00000553030 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
BEST2-204ENST00000553030 ZCCHC6Q5VYS8 1495 aaKnown RBP38.91■■■■□ 3.82
BEST2-204ENST00000553030 SHROOM4Q9ULL8 1493 aa38.87■■■■□ 3.81
BEST2-204ENST00000553030 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
BEST2-204ENST00000553030 DCAF1Q9Y4B6 1507 aa37.9■■■■□ 3.66
BEST2-204ENST00000553030 DCAF8L2P0C7V8 631 aa37.76■■■■□ 3.64
BEST2-204ENST00000553030 CHIC1Q5VXU3 224 aa37.32■■■■□ 3.56
BEST2-204ENST00000553030 MYO15BQ96JP2 1530 aa37.08■■■■□ 3.53
BEST2-204ENST00000553030 ABCC9O60706 1549 aa36.69■■■■□ 3.46
BEST2-204ENST00000553030 SCRIBQ14160 1630 aa36.46■■■■□ 3.43
BEST2-204ENST00000553030 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
BEST2-204ENST00000553030 HRCP23327 699 aa36.22■■■■□ 3.39
BEST2-204ENST00000553030 NACADO15069 1562 aa36.19■■■■□ 3.38
BEST2-204ENST00000553030 LOC105371045A0A1W2PR82 267 aa36.07■■■■□ 3.36
BEST2-204ENST00000553030 PCGF6Q9BYE7 350 aa36.03■■■■□ 3.36
BEST2-204ENST00000553030 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
BEST2-204ENST00000553030 CECR2Q9BXF3 1484 aa35.74■■■■□ 3.31
BEST2-204ENST00000553030 TRIM41Q8WV44 630 aa35.69■■■■□ 3.3
BEST2-204ENST00000553030 MROH2BQ7Z745 1585 aa35.66■■■■□ 3.3
BEST2-204ENST00000553030 TRIM26Q12899 539 aaPredicted RBP35.54■■■■□ 3.28
BEST2-204ENST00000553030 WIZO95785 1651 aa35.41■■■■□ 3.26
BEST2-204ENST00000553030 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
BEST2-204ENST00000553030 PPARGC1BQ86YN6 1023 aaKnown RBP35.22■■■■□ 3.23
BEST2-204ENST00000553030 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
BEST2-204ENST00000553030 EIF4G1Q04637 1599 aaKnown RBP35.09■■■■□ 3.21
BEST2-204ENST00000553030 TOP2AP11388 1531 aaKnown RBP35■■■■□ 3.19
BEST2-204ENST00000553030 SMARCA4P51532 1647 aa34.97■■■■□ 3.19
BEST2-204ENST00000553030 UNC13AQ9UPW8 1703 aa34.87■■■■□ 3.17
BEST2-204ENST00000553030 ZEB1P37275 1124 aaPredicted RBP34.87■■■■□ 3.17
BEST2-204ENST00000553030 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
BEST2-204ENST00000553030 SMARCA2P51531 1590 aa34.76■■■■□ 3.16
BEST2-204ENST00000553030 EHMT2Q96KQ7 1210 aa34.74■■■■□ 3.15
BEST2-204ENST00000553030 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
BEST2-204ENST00000553030 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
BEST2-204ENST00000553030 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
BEST2-204ENST00000553030 EEA1Q15075 1411 aa34.39■■■■□ 3.1
BEST2-204ENST00000553030 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
BEST2-204ENST00000553030 WRNQ14191 1432 aaPredicted RBP eCLIP34.35■■■■□ 3.09
BEST2-204ENST00000553030 SOGA1O94964 1423 aa34.32■■■■□ 3.08
BEST2-204ENST00000553030 TNIKQ9UKE5 1360 aa34.28■■■■□ 3.08
BEST2-204ENST00000553030 CEP162Q5TB80 1403 aa34.23■■■■□ 3.07
BEST2-204ENST00000553030 CSRNP3Q8WYN3 585 aa34.22■■■■□ 3.07
BEST2-204ENST00000553030 RUSC2Q8N2Y8 1516 aa34.11■■■■□ 3.05
BEST2-204ENST00000553030 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
BEST2-204ENST00000553030 GOLGA3Q08378 1498 aa34.03■■■■□ 3.04
BEST2-204ENST00000553030 BAZ1BQ9UIG0 1483 aaKnown RBP33.96■■■■□ 3.03
BEST2-204ENST00000553030 UBTFP17480 764 aaKnown RBP33.96■■■■□ 3.03
BEST2-204ENST00000553030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.92■■■■□ 3.02
BEST2-204ENST00000553030 SYNJ1O43426 1573 aa33.92■■■■□ 3.02
BEST2-204ENST00000553030 CCER1Q8TC90 406 aaPredicted RBP33.91■■■■□ 3.02
BEST2-204ENST00000553030 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
BEST2-204ENST00000553030 KIF21BO75037 1637 aa33.84■■■■□ 3.01
BEST2-204ENST00000553030 TTBK1Q5TCY1 1321 aaPredicted RBP33.66■■■□□ 2.98
BEST2-204ENST00000553030 CLIP1P30622 1438 aa33.6■■■□□ 2.97
BEST2-204ENST00000553030 TOP2BQ02880 1626 aa33.59■■■□□ 2.97
BEST2-204ENST00000553030 RAPGEF2Q9Y4G8 1499 aa33.5■■■□□ 2.95
BEST2-204ENST00000553030 VPS8Q8N3P4 1428 aa33.5■■■□□ 2.95
BEST2-204ENST00000553030 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
BEST2-204ENST00000553030 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
BEST2-204ENST00000553030 BIVM-ERCC5R4GMW8 1640 aa33.48■■■□□ 2.95
BEST2-204ENST00000553030 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.92
BEST2-204ENST00000553030 PRXQ9BXM0 1461 aa33.3■■■□□ 2.92
BEST2-204ENST00000553030 DIEXFQ68CQ4 756 aaKnown RBP33.28■■■□□ 2.92
BEST2-204ENST00000553030 APLP2Q06481 763 aa33.27■■■□□ 2.92
BEST2-204ENST00000553030 SCAF1Q9H7N4 1312 aaKnown RBP33.26■■■□□ 2.91
BEST2-204ENST00000553030 CUX1P39880 1505 aa33.21■■■□□ 2.91
BEST2-204ENST00000553030 CFTRP13569 1480 aa33.2■■■□□ 2.91
BEST2-204ENST00000553030 HNRNPUL2Q1KMD3 747 aaKnown RBP33.16■■■□□ 2.9
BEST2-204ENST00000553030 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
BEST2-204ENST00000553030 ZNF316A6NFI3 1004 aaPredicted RBP33.11■■■□□ 2.89
BEST2-204ENST00000553030 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
BEST2-204ENST00000553030 ACIN1Q9UKV3 1341 aaKnown RBP33.05■■■□□ 2.88
BEST2-204ENST00000553030 RANGAP1P46060 587 aaPredicted RBP33.04■■■□□ 2.88
BEST2-204ENST00000553030 PELP1Q8IZL8 1130 aaKnown RBP32.95■■■□□ 2.87
BEST2-204ENST00000553030 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
BEST2-204ENST00000553030 CENPBP07199 599 aaPredicted RBP32.9■■■□□ 2.86
BEST2-204ENST00000553030 PRDM2Q13029 1718 aa32.89■■■□□ 2.86
BEST2-204ENST00000553030 CLSPNQ9HAW4 1339 aa32.83■■■□□ 2.85
BEST2-204ENST00000553030 KANK4Q5T7N3 995 aaPredicted RBP32.81■■■□□ 2.84
BEST2-204ENST00000553030 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
BEST2-204ENST00000553030 ARHGAP35Q9NRY4 1499 aa32.78■■■□□ 2.84
BEST2-204ENST00000553030 RRBP1Q9P2E9 1410 aaKnown RBP32.77■■■□□ 2.84
BEST2-204ENST00000553030 IGF1RP08069 1367 aa32.75■■■□□ 2.83
BEST2-204ENST00000553030 CUX2O14529 1486 aa32.72■■■□□ 2.83
BEST2-204ENST00000553030 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
BEST2-204ENST00000553030 FGD5Q6ZNL6 1462 aa32.6■■■□□ 2.81
BEST2-204ENST00000553030 CARMIL1Q5VZK9 1371 aa32.59■■■□□ 2.81
BEST2-204ENST00000553030 MAP3K1Q13233 1512 aa32.57■■■□□ 2.81
BEST2-204ENST00000553030 GTF3C3Q9Y5Q9 886 aa32.57■■■□□ 2.8
BEST2-204ENST00000553030 CCNB3Q8WWL7 1395 aa32.57■■■□□ 2.8
BEST2-204ENST00000553030 MIER1Q8N108 512 aa32.54■■■□□ 2.8
BEST2-204ENST00000553030 CC2D2AQ9P2K1 1620 aa32.47■■■□□ 2.79
BEST2-204ENST00000553030 FANCD2Q9BXW9 1451 aa32.44■■■□□ 2.78
BEST2-204ENST00000553030 TIAM1Q13009 1591 aa32.44■■■□□ 2.78
BEST2-204ENST00000553030 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
BEST2-204ENST00000553030 DNMBPQ6XZF7 1577 aa32.34■■■□□ 2.77
BEST2-204ENST00000553030 LRRC9Q6ZRR7 1453 aa32.33■■■□□ 2.77
BEST2-204ENST00000553030 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
BEST2-204ENST00000553030 YTHDC1Q96MU7 727 aaKnown RBP32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms